Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC7.46□□□□□ -1.21
Col18a1P39061 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Col18a1P39061 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Col18a1P39061 Gm23839-201ENSMUST00000116957 109 ntBASIC7.46□□□□□ -1.21
Col18a1P39061 Gm12105-201ENSMUST00000120846 779 ntBASIC7.46□□□□□ -1.21
Col18a1P39061 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Col18a1P39061 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Col18a1P39061 Gm26167-201ENSMUST00000158423 253 ntBASIC7.46□□□□□ -1.21
Col18a1P39061 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Col18a1P39061 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Col18a1P39061 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Col18a1P39061 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC7.46□□□□□ -1.21
Col18a1P39061 Gm43175-201ENSMUST00000198450 3810 ntBASIC7.46□□□□□ -1.21
Col18a1P39061 Gm2059-201ENSMUST00000212025 287 ntBASIC7.46□□□□□ -1.21
Col18a1P39061 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC7.46□□□□□ -1.21
Col18a1P39061 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Col18a1P39061 Gm46327-201ENSMUST00000218240 365 ntBASIC7.46□□□□□ -1.21
Col18a1P39061 AC130823.2-201ENSMUST00000226169 290 ntBASIC7.46□□□□□ -1.21
Col18a1P39061 Olfr815-201ENSMUST00000071557 951 ntBASIC7.46□□□□□ -1.21
Col18a1P39061 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Col18a1P39061 n-R5s62-201ENSMUST00000082780 96 ntBASIC7.46□□□□□ -1.21
Col18a1P39061 Olfr1160-201ENSMUST00000099839 960 ntBASIC7.46□□□□□ -1.21
Col18a1P39061 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Col18a1P39061 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Col18a1P39061 Gm37367-201ENSMUST00000191771 2602 ntBASIC7.46□□□□□ -1.21
Col18a1P39061 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Col18a1P39061 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Col18a1P39061 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Col18a1P39061 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col18a1P39061 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col18a1P39061 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col18a1P39061 Gm43059-201ENSMUST00000202437 1388 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col18a1P39061 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col18a1P39061 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Col18a1P39061 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col18a1P39061 Gm14445-201ENSMUST00000117051 1484 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col18a1P39061 Igkv11-106-201ENSMUST00000103331 346 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col18a1P39061 Gm15488-201ENSMUST00000121682 670 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Col18a1P39061 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col18a1P39061 Gm3362-201ENSMUST00000148102 466 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 Gm26486-201ENSMUST00000158021 110 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 Gm23023-201ENSMUST00000158767 109 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 Gm24925-201ENSMUST00000178157 107 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC7.46□□□□□ -1.22
Col18a1P39061 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC7.46□□□□□ -1.22
Col18a1P39061 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC7.46□□□□□ -1.22
Col18a1P39061 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC7.46□□□□□ -1.22
Col18a1P39061 Gm29332-201ENSMUST00000190829 227 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC7.46□□□□□ -1.22
Col18a1P39061 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
Col18a1P39061 Gm6362-201ENSMUST00000217686 836 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 Gm8264-201ENSMUST00000217801 465 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 AC167202.1-201ENSMUST00000219027 331 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 Gm8158-201ENSMUST00000219220 465 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 Gm8112-201ENSMUST00000219637 465 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC7.46□□□□□ -1.22
Col18a1P39061 AC134860.4-201ENSMUST00000223592 978 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 AC239878.2-201ENSMUST00000224048 464 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 AC121960.3-201ENSMUST00000227077 623 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 AC125539.2-202ENSMUST00000227983 587 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 AC125539.2-201ENSMUST00000228339 753 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col18a1P39061 Gm10115-201ENSMUST00000076071 1228 ntBASIC7.46□□□□□ -1.22
Col18a1P39061 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col18a1P39061 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Col18a1P39061 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col18a1P39061 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Col18a1P39061 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Col18a1P39061 Gm37485-201ENSMUST00000192326 2953 ntBASIC7.45□□□□□ -1.22
Col18a1P39061 Gm37347-201ENSMUST00000193969 3071 ntBASIC7.45□□□□□ -1.22
Col18a1P39061 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
Col18a1P39061 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col18a1P39061 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col18a1P39061 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col18a1P39061 Gm44434-201ENSMUST00000203918 3745 ntBASIC7.45□□□□□ -1.22
Col18a1P39061 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Col18a1P39061 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col18a1P39061 Defa-ps13-201ENSMUST00000120695 204 ntBASIC7.45□□□□□ -1.22
Col18a1P39061 Gm15780-201ENSMUST00000121283 935 ntBASIC7.45□□□□□ -1.22
Col18a1P39061 Mir1898-201ENSMUST00000122643 83 ntBASIC7.45□□□□□ -1.22
Col18a1P39061 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC7.45□□□□□ -1.22
Col18a1P39061 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col18a1P39061 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC7.45□□□□□ -1.22
Col18a1P39061 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col18a1P39061 Gm21045-201ENSMUST00000183058 1020 ntBASIC7.45□□□□□ -1.22
Col18a1P39061 Gm29474-201ENSMUST00000187688 379 ntBASIC7.45□□□□□ -1.22
Col18a1P39061 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col18a1P39061 Gm18984-201ENSMUST00000193998 1124 ntBASIC7.45□□□□□ -1.22
Col18a1P39061 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col18a1P39061 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC7.45□□□□□ -1.22
Col18a1P39061 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC7.45□□□□□ -1.22
Col18a1P39061 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col18a1P39061 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col18a1P39061 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
Col18a1P39061 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms