Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC5.89□□□□□ -1.47
LdlrP35951 AC113031.2-201ENSMUST00000226132 579 ntBASIC5.89□□□□□ -1.47
LdlrP35951 AC122937.1-201ENSMUST00000226405 793 ntBASIC5.89□□□□□ -1.47
LdlrP35951 Gm8256-203ENSMUST00000228692 591 ntBASIC5.89□□□□□ -1.47
LdlrP35951 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.89□□□□□ -1.47
LdlrP35951 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
LdlrP35951 Gm8412-201ENSMUST00000077493 440 ntBASIC5.89□□□□□ -1.47
LdlrP35951 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LdlrP35951 Mir463-201ENSMUST00000093570 75 ntBASIC5.89□□□□□ -1.47
LdlrP35951 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.89□□□□□ -1.47
LdlrP35951 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
LdlrP35951 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.89□□□□□ -1.47
LdlrP35951 Gm12667-201ENSMUST00000118299 1332 ntBASIC5.89□□□□□ -1.47
LdlrP35951 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.89□□□□□ -1.47
LdlrP35951 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LdlrP35951 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LdlrP35951 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.89□□□□□ -1.47
LdlrP35951 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.89□□□□□ -1.47
LdlrP35951 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.89□□□□□ -1.47
LdlrP35951 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.89□□□□□ -1.47
LdlrP35951 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LdlrP35951 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
LdlrP35951 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
LdlrP35951 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
LdlrP35951 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LdlrP35951 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
LdlrP35951 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
LdlrP35951 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.88□□□□□ -1.47
LdlrP35951 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LdlrP35951 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LdlrP35951 Igkv11-106-201ENSMUST00000103331 346 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Gm23440-201ENSMUST00000104299 130 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Gm14931-201ENSMUST00000111079 253 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LdlrP35951 Gm11406-201ENSMUST00000117418 484 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Gm8424-201ENSMUST00000117716 988 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Gm13501-201ENSMUST00000118477 979 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Gm13991-201ENSMUST00000120190 648 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Gm16200-201ENSMUST00000120385 331 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Gm12322-201ENSMUST00000121605 389 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Gm14413-201ENSMUST00000122158 408 ntBASIC5.88□□□□□ -1.47
LdlrP35951 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LdlrP35951 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC5.88□□□□□ -1.47
LdlrP35951 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LdlrP35951 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC5.88□□□□□ -1.47
LdlrP35951 Gm22895-201ENSMUST00000157508 308 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Gm25839-201ENSMUST00000158921 103 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Gm24081-201ENSMUST00000175177 125 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.88□□□□□ -1.47
LdlrP35951 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.88□□□□□ -1.47
LdlrP35951 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.88□□□□□ -1.47
LdlrP35951 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC5.88□□□□□ -1.47
LdlrP35951 Gm3496-201ENSMUST00000188283 745 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Gm8891-201ENSMUST00000198546 832 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.88□□□□□ -1.47
LdlrP35951 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Gm18645-201ENSMUST00000209593 651 ntBASIC5.88□□□□□ -1.47
LdlrP35951 AC107663.3-201ENSMUST00000225873 601 ntBASIC5.88□□□□□ -1.47
LdlrP35951 AC162857.1-201ENSMUST00000226614 400 ntBASIC5.88□□□□□ -1.47
LdlrP35951 AC139845.2-201ENSMUST00000227504 436 ntBASIC5.88□□□□□ -1.47
LdlrP35951 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LdlrP35951 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LdlrP35951 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LdlrP35951 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LdlrP35951 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LdlrP35951 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LdlrP35951 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.88□□□□□ -1.47
LdlrP35951 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
LdlrP35951 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LdlrP35951 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
LdlrP35951 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LdlrP35951 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.88□□□□□ -1.47
LdlrP35951 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
LdlrP35951 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LdlrP35951 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LdlrP35951 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LdlrP35951 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
LdlrP35951 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LdlrP35951 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LdlrP35951 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
LdlrP35951 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LdlrP35951 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LdlrP35951 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LdlrP35951 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LdlrP35951 Gm15159-201ENSMUST00000117062 764 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm12598-201ENSMUST00000117333 830 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm8501-201ENSMUST00000117684 432 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm14529-201ENSMUST00000117894 406 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm15332-201ENSMUST00000118386 357 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm7927-201ENSMUST00000118818 880 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
LdlrP35951 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms