Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC4.51□□□□□ -1.69
Cdx1P18111 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx1P18111 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx1P18111 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
Cdx1P18111 Gm7146-201ENSMUST00000116079 739 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Gm14529-201ENSMUST00000117894 406 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Gm7312-201ENSMUST00000118798 469 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 H3f3c-201ENSMUST00000119459 411 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Calr-ps-201ENSMUST00000121776 485 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Gm13363-201ENSMUST00000122008 522 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Gm15237-201ENSMUST00000122104 469 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.51□□□□□ -1.69
Cdx1P18111 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC4.51□□□□□ -1.69
Cdx1P18111 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx1P18111 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC4.51□□□□□ -1.69
Cdx1P18111 Gm23539-201ENSMUST00000157537 224 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Gm16318-201ENSMUST00000162402 601 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Gm25065-201ENSMUST00000177914 132 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Gm6472-201ENSMUST00000178147 651 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Gm21991-201ENSMUST00000180006 508 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Gm25891-201ENSMUST00000180050 132 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC4.51□□□□□ -1.69
Cdx1P18111 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC4.51□□□□□ -1.69
Cdx1P18111 Mir7008-201ENSMUST00000184398 63 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx1P18111 Ighv3-2-201ENSMUST00000191842 349 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Gm8939-201ENSMUST00000192577 964 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Gm5886-202ENSMUST00000203957 522 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Gm45870-201ENSMUST00000211269 601 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 AC159246.1-201ENSMUST00000214478 249 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 AC147615.1-201ENSMUST00000218914 441 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 AC122371.2-201ENSMUST00000220583 366 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC4.51□□□□□ -1.69
Cdx1P18111 AC153153.2-201ENSMUST00000223572 411 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 CT030645.3-201ENSMUST00000225483 1022 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 AC122459.2-201ENSMUST00000227099 638 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 CT009600.1-201ENSMUST00000228771 337 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Cdx1P18111 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx1P18111 Gm25818-201ENSMUST00000083282 164 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Mir298-201ENSMUST00000083476 82 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Cdx1P18111 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Cdx1P18111 Gm5832-201ENSMUST00000121704 1582 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Cdx1P18111 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Cdx1P18111 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Cdx1P18111 Gm44102-201ENSMUST00000204031 1666 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx1P18111 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx1P18111 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx1P18111 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx1P18111 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Cdx1P18111 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Cdx1P18111 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx1P18111 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx1P18111 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx1P18111 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx1P18111 Gm37018-201ENSMUST00000192441 3869 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Gm25595-201ENSMUST00000102273 97 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Cdx1P18111 Gm12193-201ENSMUST00000117250 379 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Gm12245-201ENSMUST00000117266 357 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Gm11533-201ENSMUST00000120287 477 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Mup-ps28-201ENSMUST00000120686 289 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx1P18111 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx1P18111 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx1P18111 Gm22599-201ENSMUST00000157597 132 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Gm25013-201ENSMUST00000158402 128 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Cdx1P18111 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx1P18111 Gm22420-201ENSMUST00000178795 126 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx1P18111 Mir6374-201ENSMUST00000184003 107 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Gm37203-201ENSMUST00000191618 385 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 AC157822.1-201ENSMUST00000196643 80 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC4.5□□□□□ -1.69
Cdx1P18111 Gm4410-201ENSMUST00000199349 686 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Gm44251-201ENSMUST00000204963 442 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Gm5318-201ENSMUST00000205249 406 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC4.5□□□□□ -1.69
Cdx1P18111 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC4.5□□□□□ -1.69
Cdx1P18111 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC4.5□□□□□ -1.69
Cdx1P18111 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC4.5□□□□□ -1.69
Cdx1P18111 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC4.5□□□□□ -1.69
Cdx1P18111 AC133650.1-201ENSMUST00000217243 578 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.5□□□□□ -1.69
Cdx1P18111 Gm18592-201ENSMUST00000221529 276 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Gm10095-201ENSMUST00000222765 483 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 AC157572.4-201ENSMUST00000228203 549 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Cdx1P18111 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms