Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm9294-201ENSMUST00000165198 789 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Olfr331-202ENSMUST00000170501 957 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Gm2914-201ENSMUST00000186120 328 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Gm28467-201ENSMUST00000190981 318 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Gm37336-202ENSMUST00000193705 468 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Gm6543-201ENSMUST00000197353 808 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Gm4012-201ENSMUST00000221504 581 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 AC164295.2-201ENSMUST00000228539 757 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm25422-201ENSMUST00000104219 129 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm12281-201ENSMUST00000119536 298 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm11481-201ENSMUST00000120069 255 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm14563-201ENSMUST00000120571 354 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm22596-201ENSMUST00000157601 316 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm10087-201ENSMUST00000167650 330 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm27225-201ENSMUST00000183833 557 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Mir7037-201ENSMUST00000184414 65 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm8502-201ENSMUST00000185708 901 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm21147-201ENSMUST00000186046 913 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm20770-201ENSMUST00000193474 694 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm43444-201ENSMUST00000198123 291 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm3912-203ENSMUST00000211024 367 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm18541-201ENSMUST00000215935 538 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm6056-201ENSMUST00000221253 488 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm23927-201ENSMUST00000082466 215 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Chmp6P0C0A3 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm26067-201ENSMUST00000103789 110 ntBASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm8424-201ENSMUST00000117716 988 ntBASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm13579-201ENSMUST00000118519 517 ntBASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm4853-201ENSMUST00000119359 394 ntBASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm16260-201ENSMUST00000155141 304 ntBASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm26489-201ENSMUST00000157880 264 ntBASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Mir7687-201ENSMUST00000184722 59 ntBASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm18969-201ENSMUST00000189423 730 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms