Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 AC107645.1-201ENSMUST00000228660 1810 ntBASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ccdc180J3QNE4 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Ccdc180J3QNE4 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccdc180J3QNE4 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ccdc180J3QNE4 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccdc180J3QNE4 Gm4914-201ENSMUST00000119757 459 ntBASIC9.71□□□□□ -0.85
Ccdc180J3QNE4 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC9.71□□□□□ -0.85
Ccdc180J3QNE4 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ccdc180J3QNE4 Gm15790-201ENSMUST00000161109 1251 ntBASIC9.71□□□□□ -0.85
Ccdc180J3QNE4 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Ccdc180J3QNE4 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccdc180J3QNE4 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccdc180J3QNE4 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC9.71□□□□□ -0.85
Ccdc180J3QNE4 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ccdc180J3QNE4 Gm37248-201ENSMUST00000193576 3174 ntBASIC9.71□□□□□ -0.85
Ccdc180J3QNE4 Gm37593-201ENSMUST00000191669 3254 ntBASIC9.71□□□□□ -0.85
Ccdc180J3QNE4 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccdc180J3QNE4 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccdc180J3QNE4 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccdc180J3QNE4 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.86
Ccdc180J3QNE4 Gm23879-201ENSMUST00000116874 126 ntBASIC9.71□□□□□ -0.86
Ccdc180J3QNE4 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ccdc180J3QNE4 Gm37174-201ENSMUST00000194699 3058 ntBASIC9.71□□□□□ -0.86
Ccdc180J3QNE4 Gm42720-201ENSMUST00000196813 300 ntBASIC9.71□□□□□ -0.86
Ccdc180J3QNE4 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC9.71□□□□□ -0.86
Ccdc180J3QNE4 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC9.71□□□□□ -0.86
Ccdc180J3QNE4 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Ccdc180J3QNE4 Gm19936-201ENSMUST00000216414 838 ntBASIC9.71□□□□□ -0.86
Ccdc180J3QNE4 Gm29785-201ENSMUST00000217033 383 ntBASIC9.71□□□□□ -0.86
Ccdc180J3QNE4 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Gm45424-201ENSMUST00000210575 3300 ntBASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Gm24628-201ENSMUST00000122761 289 ntBASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Gm3362-201ENSMUST00000148102 466 ntBASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Esd-ps-201ENSMUST00000170684 847 ntBASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Gm4321-201ENSMUST00000200520 442 ntBASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Gm8264-201ENSMUST00000217801 465 ntBASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Gm8158-201ENSMUST00000219220 465 ntBASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Gm8112-201ENSMUST00000219637 465 ntBASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 AC124732.4-201ENSMUST00000220930 1274 ntBASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Gm16415-201ENSMUST00000080097 489 ntBASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC9.7□□□□□ -0.86
Ccdc180J3QNE4 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ccdc180J3QNE4 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc180J3QNE4 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC9.69□□□□□ -0.86
Ccdc180J3QNE4 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc180J3QNE4 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC9.69□□□□□ -0.86
Ccdc180J3QNE4 Gm37057-201ENSMUST00000192624 1916 ntBASIC9.69□□□□□ -0.86
Ccdc180J3QNE4 Gm15388-201ENSMUST00000121578 726 ntBASIC9.69□□□□□ -0.86
Ccdc180J3QNE4 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC9.69□□□□□ -0.86
Ccdc180J3QNE4 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc180J3QNE4 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc180J3QNE4 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Ccdc180J3QNE4 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ccdc180J3QNE4 Gm42998-201ENSMUST00000197053 2371 ntBASIC9.69□□□□□ -0.86
Ccdc180J3QNE4 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ccdc180J3QNE4 AC125095.1-201ENSMUST00000228387 2020 ntBASIC9.69□□□□□ -0.86
Ccdc180J3QNE4 Gm43386-201ENSMUST00000199654 4001 ntBASIC9.69□□□□□ -0.86
Ccdc180J3QNE4 Gm38189-201ENSMUST00000194495 1457 ntBASIC9.69□□□□□ -0.86
Ccdc180J3QNE4 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Nsd1-207ENSMUST00000224973 9905 ntBASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Gm43654-201ENSMUST00000200664 3417 ntBASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Gm22468-201ENSMUST00000116680 120 ntBASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Gm26248-201ENSMUST00000116700 121 ntBASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Gm26137-201ENSMUST00000116701 121 ntBASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Gm26190-201ENSMUST00000116704 121 ntBASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Gm24617-201ENSMUST00000116705 121 ntBASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Gm25778-201ENSMUST00000116713 121 ntBASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Gm25774-201ENSMUST00000116717 121 ntBASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Gm22102-201ENSMUST00000116730 121 ntBASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Gm23177-201ENSMUST00000116784 121 ntBASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Gm24193-201ENSMUST00000116801 121 ntBASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Gm24744-201ENSMUST00000116833 121 ntBASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Gm24427-201ENSMUST00000116896 121 ntBASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Gm22346-201ENSMUST00000116918 121 ntBASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Gm23606-201ENSMUST00000116938 121 ntBASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Gm22029-201ENSMUST00000116940 121 ntBASIC9.68□□□□□ -0.86
Ccdc180J3QNE4 Gm26298-201ENSMUST00000116956 121 ntBASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms