Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm17822-201ENSMUST00000204307 351 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 AC131117.2-202ENSMUST00000224539 547 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 AC124395.1-201ENSMUST00000225940 707 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 mt-Tr-201ENSMUST00000082412 68 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm13579-201ENSMUST00000118519 517 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm13473-201ENSMUST00000119289 367 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm14887-201ENSMUST00000119522 663 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm12115-201ENSMUST00000119969 447 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm14125-202ENSMUST00000120921 756 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm15316-201ENSMUST00000121082 421 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm15111-201ENSMUST00000122142 878 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm23885-201ENSMUST00000122682 294 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm23954-201ENSMUST00000157213 353 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm22214-201ENSMUST00000157563 172 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm22361-201ENSMUST00000158435 176 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm22836-201ENSMUST00000158441 61 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm22533-201ENSMUST00000158821 274 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm8358-201ENSMUST00000167222 555 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm17121-201ENSMUST00000170414 847 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm24561-201ENSMUST00000175182 95 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm23632-201ENSMUST00000175289 125 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm5283-201ENSMUST00000177874 334 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm17222-201ENSMUST00000180135 847 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm37966-201ENSMUST00000193122 326 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm19057-201ENSMUST00000194329 1197 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm36986-201ENSMUST00000195320 353 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm44673-201ENSMUST00000205692 996 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm34783-201ENSMUST00000209159 303 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm9652-201ENSMUST00000209345 163 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm4042-201ENSMUST00000216946 637 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm2398-201ENSMUST00000218347 883 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 Gm19047-201ENSMUST00000220922 1099 ntBASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC5.73□□□□□ -1.49
Pcdh1F7BJK1 CT030238.4-202ENSMUST00000226143 745 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms