Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm22273-201ENSMUST00000104040 132 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Mir1188-201ENSMUST00000116756 120 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm15400-201ENSMUST00000118944 601 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm16420-201ENSMUST00000120258 856 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm25430-201ENSMUST00000157614 289 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Mir1963-201ENSMUST00000158594 59 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm18529-201ENSMUST00000193025 1257 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm42437-201ENSMUST00000197263 923 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm43712-201ENSMUST00000198020 291 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm42428-201ENSMUST00000198677 302 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm44580-201ENSMUST00000206333 877 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Lipe-203ENSMUST00000105177 1251 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm9427-201ENSMUST00000116187 651 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm14576-201ENSMUST00000118073 1111 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm15428-201ENSMUST00000121352 333 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm3757-201ENSMUST00000125878 675 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm8321-201ENSMUST00000181691 980 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm4832-201ENSMUST00000182679 399 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm27754-201ENSMUST00000183340 126 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm18036-201ENSMUST00000195256 272 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm44673-201ENSMUST00000205692 996 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm6104-201ENSMUST00000078030 603 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm23459-201ENSMUST00000083259 131 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Srp54bE9PXC0 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Srp54bE9PXC0 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Srp54bE9PXC0 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms