Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Gm15227-201ENSMUST00000121844 399 ntBASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Gm25965-201ENSMUST00000157170 93 ntBASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Gm45876-201ENSMUST00000212698 2709 ntBASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Gm25419-201ENSMUST00000104215 191 ntBASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Gm22588-201ENSMUST00000157510 140 ntBASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Gm38221-201ENSMUST00000195146 365 ntBASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Kidins220-202ENSMUST00000220459 5381 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Col6a3E9PWQ3 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.09□□□□□ -1.6
Col6a3E9PWQ3 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Col6a3E9PWQ3 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
Col6a3E9PWQ3 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC5.09□□□□□ -1.6
Col6a3E9PWQ3 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Col6a3E9PWQ3 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Col6a3E9PWQ3 Zfp638-201ENSMUST00000032088 6199 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
Col6a3E9PWQ3 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm14103-201ENSMUST00000119075 366 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Mir5134-201ENSMUST00000175529 78 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Spin2g-201ENSMUST00000178425 687 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 CT030242.2-201ENSMUST00000221588 148 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 AC151730.2-201ENSMUST00000224027 475 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm29320-201ENSMUST00000185235 615 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm29179-202ENSMUST00000186138 615 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm28598-201ENSMUST00000186490 615 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm29448-201ENSMUST00000186675 615 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm29314-201ENSMUST00000186800 615 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm28253-202ENSMUST00000187971 615 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm28468-201ENSMUST00000188536 615 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm29268-201ENSMUST00000188669 615 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm29169-201ENSMUST00000189835 615 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm28978-201ENSMUST00000191120 615 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm37172-201ENSMUST00000191926 615 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm12007-201ENSMUST00000120978 597 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm14710-201ENSMUST00000146082 1066 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm20940-201ENSMUST00000197308 360 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm6043-201ENSMUST00000099961 492 ntBASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Cc2d2a-201ENSMUST00000048150 5484 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a3E9PWQ3 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms