Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm4927-201ENSMUST00000219548 1318 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm11799-201ENSMUST00000116110 460 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm9836-201ENSMUST00000117132 216 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm11385-201ENSMUST00000121513 570 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm12451-201ENSMUST00000121636 633 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm12094-201ENSMUST00000121781 472 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm13669-201ENSMUST00000122366 457 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm26353-201ENSMUST00000158224 255 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm23343-201ENSMUST00000158964 143 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm26159-201ENSMUST00000158968 104 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm6223-201ENSMUST00000178436 871 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm6113-201ENSMUST00000180319 639 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm27225-201ENSMUST00000183833 557 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Mir7j-201ENSMUST00000184427 122 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm29413-201ENSMUST00000186019 880 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm28597-201ENSMUST00000187664 666 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm29639-201ENSMUST00000188375 580 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm29650-201ENSMUST00000188485 742 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm29545-201ENSMUST00000188878 694 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm28337-201ENSMUST00000190425 666 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm20871-201ENSMUST00000191322 931 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm34015-201ENSMUST00000194908 451 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm42622-201ENSMUST00000197229 355 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm17908-201ENSMUST00000205552 1256 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm29817-201ENSMUST00000210098 172 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm18620-201ENSMUST00000222295 324 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Olfr192-201ENSMUST00000080251 925 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm24032-201ENSMUST00000083932 159 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Gm37474-201ENSMUST00000194812 1814 ntBASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Sec61a2Q9JLR1 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Sec61a2Q9JLR1 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.59□□□□□ -1.52
Sec61a2Q9JLR1 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.59□□□□□ -1.52
Sec61a2Q9JLR1 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.59□□□□□ -1.52
Sec61a2Q9JLR1 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Sec61a2Q9JLR1 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.52
Sec61a2Q9JLR1 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms