Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 AC121542.1-201ENSMUST00000227245 721 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm8256-203ENSMUST00000228692 591 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm14879-201ENSMUST00000117308 507 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm13311-201ENSMUST00000117863 379 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm6893-201ENSMUST00000118385 522 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm6744-201ENSMUST00000119303 543 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm14842-201ENSMUST00000119577 269 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm12881-201ENSMUST00000121191 203 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm25185-201ENSMUST00000157754 96 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm3141-201ENSMUST00000168726 499 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm4845-201ENSMUST00000179202 562 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm27025-201ENSMUST00000182392 942 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm29281-201ENSMUST00000188077 381 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm43418-201ENSMUST00000201334 428 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm44681-201ENSMUST00000208447 842 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm45724-201ENSMUST00000213031 420 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm6369-201ENSMUST00000069626 412 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm16415-201ENSMUST00000080097 489 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm23624-201ENSMUST00000082463 321 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 AC153959.1-201ENSMUST00000213617 1694 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ddx56Q9D0R4 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC6.27□□□□□ -1.4
Ddx56Q9D0R4 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Gm7754-201ENSMUST00000223075 2064 ntBASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Gm25422-201ENSMUST00000104219 129 ntBASIC6.27□□□□□ -1.41
Ddx56Q9D0R4 Gm22019-201ENSMUST00000104359 96 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms