Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm14876-201ENSMUST00000120795 327 ntBASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Gm22106-201ENSMUST00000122544 127 ntBASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Gm28975-201ENSMUST00000186412 686 ntBASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Mrgprb13-201ENSMUST00000188191 985 ntBASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Gm28066-201ENSMUST00000188657 472 ntBASIC6.15□□□□□ -1.42
Smc1aQ9CU62 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Gm42452-201ENSMUST00000199749 617 ntBASIC6.15□□□□□ -1.42
Smc1aQ9CU62 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Gm44053-201ENSMUST00000203364 929 ntBASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Gm18689-201ENSMUST00000203969 902 ntBASIC6.15□□□□□ -1.42
Smc1aQ9CU62 AC151971.3-201ENSMUST00000214694 404 ntBASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 AC134537.2-201ENSMUST00000217770 575 ntBASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Gm7042-201ENSMUST00000223027 384 ntBASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC6.15□□□□□ -1.43
Smc1aQ9CU62 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Smc1aQ9CU62 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Smc1aQ9CU62 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Smc1aQ9CU62 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Smc1aQ9CU62 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm45415-201ENSMUST00000209644 2074 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Lipe-203ENSMUST00000105177 1251 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm16205-201ENSMUST00000117720 1027 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm11894-201ENSMUST00000121579 328 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm24186-201ENSMUST00000157983 127 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm23115-201ENSMUST00000158480 108 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm9294-201ENSMUST00000165198 789 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm7335-201ENSMUST00000172475 373 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm22993-201ENSMUST00000175423 254 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm28353-201ENSMUST00000186482 570 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm28533-201ENSMUST00000186741 570 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm2429-201ENSMUST00000194635 586 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm45845-201ENSMUST00000207326 582 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm45525-201ENSMUST00000210800 389 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm8288-201ENSMUST00000223406 593 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 AC122858.1-201ENSMUST00000226212 433 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 AC122858.3-201ENSMUST00000226341 740 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm7676-201ENSMUST00000084055 319 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm25099-201ENSMUST00000093716 116 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Smc1aQ9CU62 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm42492-201ENSMUST00000195780 2915 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm13473-201ENSMUST00000119289 367 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm15044-201ENSMUST00000120703 598 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm14679-201ENSMUST00000121536 722 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm15877-201ENSMUST00000121897 964 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm26172-201ENSMUST00000158421 134 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm17142-201ENSMUST00000164933 645 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms