Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Gm37254-201ENSMUST00000193542 3901 ntBASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Gm5558-201ENSMUST00000178933 495 ntBASIC5.16□□□□□ -1.58
Cdh23Q99PF4 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Gm37416-201ENSMUST00000193596 318 ntBASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Gm26165-201ENSMUST00000083791 138 ntBASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.16□□□□□ -1.58
Cdh23Q99PF4 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Nup210l-201ENSMUST00000029548 5681 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Gm13501-201ENSMUST00000118477 979 ntBASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Gm29138-201ENSMUST00000191444 348 ntBASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Igkv8-31-201ENSMUST00000200040 372 ntBASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Gm44234-201ENSMUST00000204246 900 ntBASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Gm34272-201ENSMUST00000208886 253 ntBASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdh23Q99PF4 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.16□□□□□ -1.58
Cdh23Q99PF4 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.15□□□□□ -1.58
Cdh23Q99PF4 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdh23Q99PF4 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Cdh23Q99PF4 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdh23Q99PF4 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdh23Q99PF4 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.15□□□□□ -1.58
Cdh23Q99PF4 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdh23Q99PF4 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC5.15□□□□□ -1.58
Cdh23Q99PF4 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC5.15□□□□□ -1.58
Cdh23Q99PF4 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC5.15□□□□□ -1.58
Cdh23Q99PF4 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.15□□□□□ -1.58
Cdh23Q99PF4 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdh23Q99PF4 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdh23Q99PF4 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdh23Q99PF4 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.15□□□□□ -1.58
Cdh23Q99PF4 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Cdh23Q99PF4 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdh23Q99PF4 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Cdh23Q99PF4 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Cdh23Q99PF4 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Gm24935-201ENSMUST00000103770 110 ntBASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Gm23593-201ENSMUST00000104309 120 ntBASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Gm18382-201ENSMUST00000194394 582 ntBASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Gm20768-201ENSMUST00000199527 2338 ntBASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Gm24124-201ENSMUST00000104103 132 ntBASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Gm16149-201ENSMUST00000117631 309 ntBASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Gm28654-201ENSMUST00000189801 379 ntBASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Gm18016-201ENSMUST00000216119 801 ntBASIC5.15□□□□□ -1.59
Cdh23Q99PF4 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Mir323-201ENSMUST00000083683 86 ntBASIC5.15□□□□□ -1.59
Cdh23Q99PF4 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.14□□□□□ -1.59
Cdh23Q99PF4 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.14□□□□□ -1.59
Cdh23Q99PF4 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Cdh23Q99PF4 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cdh23Q99PF4 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Cdh23Q99PF4 Tmem170b-201ENSMUST00000129449 7168 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cdh23Q99PF4 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdh23Q99PF4 Gm12186-201ENSMUST00000119050 945 ntBASIC5.14□□□□□ -1.59
Cdh23Q99PF4 Gm5809-201ENSMUST00000121854 529 ntBASIC5.14□□□□□ -1.59
Cdh23Q99PF4 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms