Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm25445-201ENSMUST00000158996 299 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm16026-202ENSMUST00000159695 772 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm16563-201ENSMUST00000162673 423 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm6245-201ENSMUST00000164699 768 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm7745-201ENSMUST00000182235 973 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm29124-201ENSMUST00000186576 452 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm19280-201ENSMUST00000190191 205 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm36939-201ENSMUST00000194889 439 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm43774-201ENSMUST00000196327 878 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm7181-201ENSMUST00000202197 434 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm44219-201ENSMUST00000203005 273 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 AL772397.1-201ENSMUST00000216707 606 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm23624-201ENSMUST00000082463 321 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.55□□□□□ -1.52
Msh4Q99MT2 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Msh4Q99MT2 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Msh4Q99MT2 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msh4Q99MT2 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.54□□□□□ -1.52
Msh4Q99MT2 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msh4Q99MT2 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.54□□□□□ -1.52
Msh4Q99MT2 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Gm13359-201ENSMUST00000119000 695 ntBASIC5.54□□□□□ -1.52
Msh4Q99MT2 Gm15335-201ENSMUST00000122442 411 ntBASIC5.54□□□□□ -1.52
Msh4Q99MT2 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Msh4Q99MT2 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Gm22492-201ENSMUST00000157192 297 ntBASIC5.54□□□□□ -1.52
Msh4Q99MT2 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.54□□□□□ -1.52
Msh4Q99MT2 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.54□□□□□ -1.52
Msh4Q99MT2 Gm10074-201ENSMUST00000174543 249 ntBASIC5.54□□□□□ -1.52
Msh4Q99MT2 Gm23631-201ENSMUST00000175291 123 ntBASIC5.54□□□□□ -1.52
Msh4Q99MT2 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.54□□□□□ -1.52
Msh4Q99MT2 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.54□□□□□ -1.52
Msh4Q99MT2 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC5.54□□□□□ -1.52
Msh4Q99MT2 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Gm37966-201ENSMUST00000193122 326 ntBASIC5.54□□□□□ -1.52
Msh4Q99MT2 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Gm8748-201ENSMUST00000211125 587 ntBASIC5.54□□□□□ -1.52
Msh4Q99MT2 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Mir412-201ENSMUST00000083636 80 ntBASIC5.54□□□□□ -1.52
Msh4Q99MT2 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.54□□□□□ -1.52
Msh4Q99MT2 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.54□□□□□ -1.52
Msh4Q99MT2 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Gm6545-201ENSMUST00000217186 1786 ntBASIC5.54□□□□□ -1.52
Msh4Q99MT2 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Msh4Q99MT2 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms