Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Nkx6-1Q99MA9 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx6-1Q99MA9 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Nkx6-1Q99MA9 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx6-1Q99MA9 Gm2223-201ENSMUST00000112099 1350 ntBASIC6.18□□□□□ -1.42
Nkx6-1Q99MA9 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Nkx6-1Q99MA9 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm26384-201ENSMUST00000102183 110 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm15001-201ENSMUST00000117657 795 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm11984-201ENSMUST00000118142 766 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm14506-201ENSMUST00000121165 536 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm15959-201ENSMUST00000121724 368 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm6647-201ENSMUST00000170514 641 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm6155-201ENSMUST00000173735 341 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm6223-201ENSMUST00000178436 871 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm28661-201ENSMUST00000188231 681 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm43015-201ENSMUST00000199087 565 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm43215-201ENSMUST00000199108 252 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 BC049739-201ENSMUST00000202626 660 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm45189-201ENSMUST00000208567 363 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm18557-201ENSMUST00000218710 433 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 AC141642.1-201ENSMUST00000220598 229 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm9315-201ENSMUST00000222696 908 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 CT030662.2-201ENSMUST00000226942 805 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm24207-201ENSMUST00000082781 108 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm24319-201ENSMUST00000083389 107 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm42967-201ENSMUST00000198647 2312 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm12919-201ENSMUST00000119855 1594 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm29730-201ENSMUST00000192986 1396 ntBASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx6-1Q99MA9 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Nkx6-1Q99MA9 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx6-1Q99MA9 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Nkx6-1Q99MA9 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Nkx6-1Q99MA9 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx6-1Q99MA9 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Nkx6-1Q99MA9 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Nkx6-1Q99MA9 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx6-1Q99MA9 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.16□□□□□ -1.42
Nkx6-1Q99MA9 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Nkx6-1Q99MA9 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx6-1Q99MA9 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.16□□□□□ -1.42
Nkx6-1Q99MA9 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx6-1Q99MA9 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Nkx6-1Q99MA9 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx6-1Q99MA9 Gm22019-201ENSMUST00000104359 96 ntBASIC6.16□□□□□ -1.42
Nkx6-1Q99MA9 Gm22771-201ENSMUST00000104449 91 ntBASIC6.16□□□□□ -1.42
Nkx6-1Q99MA9 Mir466j-201ENSMUST00000116876 122 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms