Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Scrt1Q99M85 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Gm6520-201ENSMUST00000200636 410 ntBASIC4.82□□□□□ -1.64
Scrt1Q99M85 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.82□□□□□ -1.64
Scrt1Q99M85 AC134333.1-201ENSMUST00000204536 944 ntBASIC4.82□□□□□ -1.64
Scrt1Q99M85 Gm44259-201ENSMUST00000204996 298 ntBASIC4.82□□□□□ -1.64
Scrt1Q99M85 Api5-ps-201ENSMUST00000206607 577 ntBASIC4.82□□□□□ -1.64
Scrt1Q99M85 Gm45845-201ENSMUST00000207326 582 ntBASIC4.82□□□□□ -1.64
Scrt1Q99M85 Supt4b-201ENSMUST00000214434 351 ntBASIC4.82□□□□□ -1.64
Scrt1Q99M85 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC4.82□□□□□ -1.64
Scrt1Q99M85 AC172027.1-201ENSMUST00000217659 337 ntBASIC4.82□□□□□ -1.64
Scrt1Q99M85 AC158803.2-201ENSMUST00000219452 679 ntBASIC4.82□□□□□ -1.64
Scrt1Q99M85 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC4.82□□□□□ -1.64
Scrt1Q99M85 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC4.82□□□□□ -1.64
Scrt1Q99M85 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.82□□□□□ -1.64
Scrt1Q99M85 CT030184.2-201ENSMUST00000223064 263 ntBASIC4.82□□□□□ -1.64
Scrt1Q99M85 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.82□□□□□ -1.64
Scrt1Q99M85 CT025552.1-201ENSMUST00000224561 521 ntBASIC4.82□□□□□ -1.64
Scrt1Q99M85 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scrt1Q99M85 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Gm25147-201ENSMUST00000083030 105 ntBASIC4.82□□□□□ -1.64
Scrt1Q99M85 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Gm42725-201ENSMUST00000199296 4193 ntBASIC4.82□□□□□ -1.64
Scrt1Q99M85 Gm43027-201ENSMUST00000202906 3691 ntBASIC4.82□□□□□ -1.64
Scrt1Q99M85 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Scrt1Q99M85 Gm45177-201ENSMUST00000209104 2307 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm18066-201ENSMUST00000210904 1774 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm43462-201ENSMUST00000200265 3648 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm24541-201ENSMUST00000103871 96 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm25422-201ENSMUST00000104219 129 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm11550-201ENSMUST00000118210 699 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 H3f3c-201ENSMUST00000119459 411 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm12849-201ENSMUST00000120013 739 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm6620-201ENSMUST00000120113 715 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm11761-201ENSMUST00000121392 445 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm23513-201ENSMUST00000158181 133 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm3170-201ENSMUST00000168753 850 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Esd-ps-201ENSMUST00000170684 847 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm3348-201ENSMUST00000177813 850 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Mir6400-201ENSMUST00000184870 92 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm37421-201ENSMUST00000193088 132 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm18427-201ENSMUST00000195422 515 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Glud-ps-201ENSMUST00000206310 657 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 AC153153.2-201ENSMUST00000223572 411 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scrt1Q99M85 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC4.81□□□□□ -1.64
Scrt1Q99M85 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scrt1Q99M85 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms