Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm23274-201ENSMUST00000104056 130 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm14756-201ENSMUST00000116395 240 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm23879-201ENSMUST00000116874 126 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm16128-201ENSMUST00000117855 626 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm11366-201ENSMUST00000119279 429 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm22726-201ENSMUST00000158089 179 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm2914-201ENSMUST00000186120 328 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm28186-201ENSMUST00000187447 679 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm44259-201ENSMUST00000204996 298 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm6009-201ENSMUST00000210848 280 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 AC211878.5-201ENSMUST00000221697 409 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm23626-201ENSMUST00000082458 133 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.54□□□□□ -1.52
Cstf1Q99LC2 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Gm5405-201ENSMUST00000120478 609 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Gm14515-201ENSMUST00000121327 216 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Gm11759-201ENSMUST00000121742 464 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Gm23211-201ENSMUST00000122717 308 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Gm22650-201ENSMUST00000175138 105 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Gm17994-201ENSMUST00000209260 533 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 AC131117.2-203ENSMUST00000225886 950 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Gm4822-201ENSMUST00000077551 479 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cstf1Q99LC2 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Cstf1Q99LC2 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.52□□□□□ -1.53
Cstf1Q99LC2 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cstf1Q99LC2 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.52□□□□□ -1.53
Cstf1Q99LC2 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cstf1Q99LC2 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cstf1Q99LC2 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cstf1Q99LC2 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cstf1Q99LC2 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Cstf1Q99LC2 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Cstf1Q99LC2 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.52□□□□□ -1.53
Cstf1Q99LC2 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cstf1Q99LC2 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.52□□□□□ -1.53
Cstf1Q99LC2 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cstf1Q99LC2 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cstf1Q99LC2 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms