Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.19□□□□□ -1.58
Lsm1Q8VC85 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm13772-201ENSMUST00000118431 317 ntBASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm13013-201ENSMUST00000119087 523 ntBASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm13440-201ENSMUST00000121665 496 ntBASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Mir1900-201ENSMUST00000122714 78 ntBASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm22411-201ENSMUST00000175462 126 ntBASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm22002-201ENSMUST00000175622 125 ntBASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm37609-201ENSMUST00000191778 678 ntBASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm22684-201ENSMUST00000082849 132 ntBASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.18□□□□□ -1.58
Lsm1Q8VC85 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Gm14985-201ENSMUST00000118693 786 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Gm14712-201ENSMUST00000120195 772 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Gm25861-201ENSMUST00000158251 109 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Gm15812-201ENSMUST00000162331 748 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Gm17152-201ENSMUST00000172430 535 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Gm29148-201ENSMUST00000188140 336 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Gm43516-201ENSMUST00000196891 322 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Gm42990-201ENSMUST00000199231 312 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Gm18541-201ENSMUST00000215935 538 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 AC116596.2-203ENSMUST00000227345 731 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Gm22126-201ENSMUST00000083244 142 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 157 ms