Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Gm12140-201ENSMUST00000121214 544 ntBASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Gm6872-201ENSMUST00000165001 700 ntBASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Mirlet7e-201ENSMUST00000196737 93 ntBASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Gm43850-201ENSMUST00000202021 578 ntBASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Gm21112-201ENSMUST00000212224 578 ntBASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Gm7760-201ENSMUST00000212265 578 ntBASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Gm7807-201ENSMUST00000212475 578 ntBASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 AC118006.2-201ENSMUST00000224167 962 ntBASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 AC127371.1-201ENSMUST00000228516 312 ntBASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc9Q8VC31 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Ccdc9Q8VC31 Gm37363-201ENSMUST00000192336 2233 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Gm43169-201ENSMUST00000199544 4734 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Gm19666-201ENSMUST00000198176 1893 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Gm26289-201ENSMUST00000104169 131 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Gm14385-201ENSMUST00000116315 876 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Gm13755-201ENSMUST00000118509 305 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Gm12507-201ENSMUST00000119155 415 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Gm6744-201ENSMUST00000119303 543 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Gm15696-201ENSMUST00000121730 445 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Gm23894-201ENSMUST00000158107 313 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Gm29124-201ENSMUST00000186576 452 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Mir6516-201ENSMUST00000196236 110 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Gm43354-201ENSMUST00000196862 346 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Gm42886-201ENSMUST00000199214 466 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Gm19936-201ENSMUST00000216414 838 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Gm6562-201ENSMUST00000221903 464 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Gm42910-201ENSMUST00000198917 2921 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Gm2987-201ENSMUST00000187673 1693 ntBASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Ccdc9Q8VC31 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms