Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm15854-201ENSMUST00000118879 808 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm15388-201ENSMUST00000121578 726 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm15488-201ENSMUST00000121682 670 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm12094-201ENSMUST00000121781 472 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm25979-201ENSMUST00000157177 138 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm24498-201ENSMUST00000158445 102 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm16102-201ENSMUST00000160955 420 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm3339-201ENSMUST00000163462 475 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm24969-201ENSMUST00000180331 79 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm21524-201ENSMUST00000190499 696 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm37771-201ENSMUST00000193121 265 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm37196-201ENSMUST00000194762 906 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm43810-201ENSMUST00000201018 232 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm7946-201ENSMUST00000203326 958 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm44809-201ENSMUST00000208305 993 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm9375-201ENSMUST00000208899 903 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm8863-201ENSMUST00000216630 926 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 AC161252.1-201ENSMUST00000225536 467 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 CT010577.1-202ENSMUST00000226187 1903 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 AC124183.1-201ENSMUST00000222367 2135 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm42534-201ENSMUST00000196063 1754 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm45250-201ENSMUST00000209414 3592 ntBASIC5.75□□□□□ -1.49
Clrn1Q8K445 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Clrn1Q8K445 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Clrn1Q8K445 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Clrn1Q8K445 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.74□□□□□ -1.49
Clrn1Q8K445 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms