Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm14791-201ENSMUST00000119061 1166 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm13473-201ENSMUST00000119289 367 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Mir3058-201ENSMUST00000175126 91 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm21839-201ENSMUST00000179536 378 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm37024-201ENSMUST00000192224 868 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Ighv1-30-201ENSMUST00000194082 349 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm29747-201ENSMUST00000194764 585 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm42643-201ENSMUST00000200504 279 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm7802-201ENSMUST00000216464 262 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 AC152169.2-201ENSMUST00000224558 613 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 AC154730.1-201ENSMUST00000227874 816 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm28240-201ENSMUST00000187560 2053 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm24235-201ENSMUST00000104319 129 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm14520-201ENSMUST00000119258 387 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm6175-201ENSMUST00000121351 400 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm16164-201ENSMUST00000160078 468 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm29519-201ENSMUST00000186994 398 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm2979-201ENSMUST00000193442 463 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm45171-201ENSMUST00000206360 736 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Mir7b-201ENSMUST00000083557 111 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc28bQ8CEG5 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28bQ8CEG5 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28bQ8CEG5 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.28□□□□□ -1.56
Ccdc28bQ8CEG5 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28bQ8CEG5 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28bQ8CEG5 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc28bQ8CEG5 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc28bQ8CEG5 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.28□□□□□ -1.56
Ccdc28bQ8CEG5 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ccdc28bQ8CEG5 Gm23746-201ENSMUST00000104229 125 ntBASIC5.28□□□□□ -1.56
Ccdc28bQ8CEG5 Gm23440-201ENSMUST00000104299 130 ntBASIC5.28□□□□□ -1.56
Ccdc28bQ8CEG5 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28bQ8CEG5 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms