Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Vps53Q8CCB4 Gm42702-201ENSMUST00000199515 4217 ntBASIC6.61□□□□□ -1.35
Vps53Q8CCB4 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Vps53Q8CCB4 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Vps53Q8CCB4 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.61□□□□□ -1.35
Vps53Q8CCB4 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Vps53Q8CCB4 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC6.61□□□□□ -1.35
Vps53Q8CCB4 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Vps53Q8CCB4 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Vps53Q8CCB4 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Vps53Q8CCB4 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm11483-201ENSMUST00000119839 247 ntBASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm25826-201ENSMUST00000157090 137 ntBASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm25489-201ENSMUST00000158727 141 ntBASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm27887-201ENSMUST00000184367 102 ntBASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm18444-201ENSMUST00000191239 629 ntBASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm38015-201ENSMUST00000193048 188 ntBASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm37716-201ENSMUST00000193553 947 ntBASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 AC153529.1-201ENSMUST00000217818 370 ntBASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 AC140209.1-201ENSMUST00000227875 284 ntBASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms