Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm25459-201ENSMUST00000157953 114 ntBASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Gm24731-201ENSMUST00000158227 131 ntBASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Gm37987-201ENSMUST00000194999 825 ntBASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Gm42581-201ENSMUST00000201774 966 ntBASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Gm43629-201ENSMUST00000201782 704 ntBASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Gm19596-201ENSMUST00000203685 739 ntBASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Gm44091-201ENSMUST00000205212 649 ntBASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Gm6828-201ENSMUST00000207902 1186 ntBASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC6.16□□□□□ -1.42
Trim9Q8C7M3 CU024910.1-201ENSMUST00000214310 418 ntBASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Gm19174-201ENSMUST00000216944 956 ntBASIC6.16□□□□□ -1.42
Trim9Q8C7M3 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim9Q8C7M3 AC121137.1-201ENSMUST00000225272 602 ntBASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim9Q8C7M3 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim9Q8C7M3 AC159476.1-201ENSMUST00000215914 1668 ntBASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim9Q8C7M3 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm44695-201ENSMUST00000205567 1631 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm24340-201ENSMUST00000104208 97 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm11433-201ENSMUST00000118318 228 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm14472-201ENSMUST00000119815 282 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm25445-201ENSMUST00000158996 299 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm17061-201ENSMUST00000163167 499 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm7733-201ENSMUST00000199038 919 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm44134-202ENSMUST00000204777 545 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm18537-201ENSMUST00000205709 989 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm18598-201ENSMUST00000207724 597 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm44571-201ENSMUST00000208092 533 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 AC153516.1-201ENSMUST00000217955 779 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm4510-201ENSMUST00000218265 427 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 AC116589.4-201ENSMUST00000222390 216 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 AC167192.4-201ENSMUST00000224087 993 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 AC114572.1-201ENSMUST00000227262 300 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 AC154692.1-201ENSMUST00000228314 544 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm22807-201ENSMUST00000082737 129 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Gm10221-201ENSMUST00000088299 309 ntBASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim9Q8C7M3 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.15□□□□□ -1.43
Trim9Q8C7M3 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Trim9Q8C7M3 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Trim9Q8C7M3 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim9Q8C7M3 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.15□□□□□ -1.43
Trim9Q8C7M3 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.15□□□□□ -1.43
Trim9Q8C7M3 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim9Q8C7M3 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim9Q8C7M3 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Trim9Q8C7M3 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim9Q8C7M3 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim9Q8C7M3 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim9Q8C7M3 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim9Q8C7M3 Gm37018-201ENSMUST00000192441 3869 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms