Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm13473-201ENSMUST00000119289 367 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm11369-201ENSMUST00000120812 318 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm13162-201ENSMUST00000121481 454 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm23430-201ENSMUST00000122490 314 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm25669-201ENSMUST00000157699 112 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm24687-201ENSMUST00000157758 241 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm26170-201ENSMUST00000158419 148 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm27679-201ENSMUST00000184612 84 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm18183-201ENSMUST00000191024 615 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm4410-201ENSMUST00000199349 686 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm2040-201ENSMUST00000202979 289 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm20997-201ENSMUST00000205148 231 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm42841-201ENSMUST00000199806 1932 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm9427-201ENSMUST00000116187 651 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm15531-201ENSMUST00000118062 252 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm15741-201ENSMUST00000119401 754 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm7079-201ENSMUST00000119726 171 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm14712-201ENSMUST00000120195 772 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm11866-201ENSMUST00000120209 335 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm3757-201ENSMUST00000125878 675 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm37336-202ENSMUST00000193705 468 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm43044-201ENSMUST00000198091 379 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm44134-202ENSMUST00000204777 545 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm19880-201ENSMUST00000207731 318 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 AC158536.1-201ENSMUST00000222510 256 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm45322-201ENSMUST00000211642 1361 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc40Q8BI79 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm42440-201ENSMUST00000197906 2284 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms