Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm20541-201ENSMUST00000173035 1406 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm19131-202ENSMUST00000203464 3208 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm43025-201ENSMUST00000201764 1886 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm14521-201ENSMUST00000119545 350 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm13245-201ENSMUST00000119646 260 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm26372-201ENSMUST00000157831 236 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm25906-201ENSMUST00000158489 126 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm4617-201ENSMUST00000178993 331 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm1972-201ENSMUST00000181606 964 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm28467-201ENSMUST00000190981 318 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm38268-201ENSMUST00000195813 193 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Mir219c-201ENSMUST00000199860 60 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm43478-201ENSMUST00000200381 292 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm4374-201ENSMUST00000204929 424 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm45246-201ENSMUST00000210820 367 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 AC138284.5-201ENSMUST00000214389 652 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 AC123658.1-201ENSMUST00000228364 867 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 n-R5s204-201ENSMUST00000082972 119 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 AC162908.1-201ENSMUST00000219164 4563 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Usp49Q6P9L4 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp49Q6P9L4 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp49Q6P9L4 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.15□□□□□ -1.42
Usp49Q6P9L4 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
Usp49Q6P9L4 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp49Q6P9L4 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.15□□□□□ -1.42
Usp49Q6P9L4 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
Usp49Q6P9L4 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp49Q6P9L4 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Usp49Q6P9L4 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC6.15□□□□□ -1.42
Usp49Q6P9L4 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Usp49Q6P9L4 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Usp49Q6P9L4 Gm12303-201ENSMUST00000119506 673 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms