Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Mir7008-201ENSMUST00000184398 63 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Mir7687-201ENSMUST00000184722 59 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Mir7674-201ENSMUST00000184964 63 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm29159-201ENSMUST00000187969 379 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm37503-201ENSMUST00000192088 319 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm18409-202ENSMUST00000220105 529 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm23508-201ENSMUST00000083079 72 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm24230-201ENSMUST00000104313 129 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm12131-201ENSMUST00000117479 359 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm11975-201ENSMUST00000118772 481 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm12281-201ENSMUST00000119536 298 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm12413-201ENSMUST00000121508 312 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm26489-201ENSMUST00000157880 264 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm17907-201ENSMUST00000173150 710 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28604-201ENSMUST00000186629 484 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28566-201ENSMUST00000186714 484 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28194-201ENSMUST00000187412 484 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28886-202ENSMUST00000187889 484 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 112.8 ms