Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm25682-201ENSMUST00000083942 164 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.34□□□□□ -1.56
Trafd1Q3UDK1 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.56
Trafd1Q3UDK1 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Trafd1Q3UDK1 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm24265-201ENSMUST00000101833 141 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm11481-201ENSMUST00000120069 255 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm13024-201ENSMUST00000121756 718 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm13077-201ENSMUST00000121941 484 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm12650-201ENSMUST00000121966 258 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm23224-201ENSMUST00000158122 271 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm17142-201ENSMUST00000164933 645 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm22122-201ENSMUST00000175147 200 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm24407-201ENSMUST00000177864 141 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm37492-201ENSMUST00000191948 376 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm44539-201ENSMUST00000206010 238 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm22807-201ENSMUST00000082737 129 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm24525-201ENSMUST00000082917 151 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm23511-201ENSMUST00000083084 164 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.33□□□□□ -1.56
Trafd1Q3UDK1 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm15034-201ENSMUST00000120043 349 ntBASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm12936-201ENSMUST00000121439 301 ntBASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm24216-201ENSMUST00000158259 117 ntBASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm23774-201ENSMUST00000158990 131 ntBASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm19029-201ENSMUST00000189923 564 ntBASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm18587-201ENSMUST00000213736 841 ntBASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms