Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm14790-201ENSMUST00000117760 1293 ntBASIC8.49□□□□□ -1.05
Col17a1Q07563 Gm23781-201ENSMUST00000157940 308 ntBASIC8.49□□□□□ -1.05
Col17a1Q07563 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC8.49□□□□□ -1.05
Col17a1Q07563 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC8.49□□□□□ -1.05
Col17a1Q07563 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC8.49□□□□□ -1.05
Col17a1Q07563 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC8.49□□□□□ -1.05
Col17a1Q07563 Gm37828-201ENSMUST00000192496 432 ntBASIC8.49□□□□□ -1.05
Col17a1Q07563 Gm9442-201ENSMUST00000194242 319 ntBASIC8.49□□□□□ -1.05
Col17a1Q07563 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC8.49□□□□□ -1.05
Col17a1Q07563 Gm4501-201ENSMUST00000207330 551 ntBASIC8.49□□□□□ -1.05
Col17a1Q07563 Gm4558-201ENSMUST00000207886 521 ntBASIC8.49□□□□□ -1.05
Col17a1Q07563 AC154724.1-201ENSMUST00000225782 821 ntBASIC8.49□□□□□ -1.05
Col17a1Q07563 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Col17a1Q07563 Gm37283-201ENSMUST00000193111 1571 ntBASIC8.49□□□□□ -1.05
Col17a1Q07563 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col17a1Q07563 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Col17a1Q07563 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Col17a1Q07563 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col17a1Q07563 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Col17a1Q07563 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm20541-201ENSMUST00000173035 1406 ntBASIC8.48□□□□□ -1.05
Col17a1Q07563 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm44584-201ENSMUST00000208395 2880 ntBASIC8.48□□□□□ -1.05
Col17a1Q07563 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC8.48□□□□□ -1.05
Col17a1Q07563 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm14107-201ENSMUST00000117774 330 ntBASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm11584-201ENSMUST00000120636 325 ntBASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm15263-201ENSMUST00000121556 642 ntBASIC8.48□□□□□ -1.05
Col17a1Q07563 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Scarna10-201ENSMUST00000158992 325 ntBASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm22650-201ENSMUST00000175138 105 ntBASIC8.48□□□□□ -1.05
Col17a1Q07563 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm9443-201ENSMUST00000188406 816 ntBASIC8.48□□□□□ -1.05
Col17a1Q07563 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm3816-201ENSMUST00000209803 433 ntBASIC8.48□□□□□ -1.05
Col17a1Q07563 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Col17a1Q07563 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm37611-201ENSMUST00000195250 2028 ntBASIC8.48□□□□□ -1.05
Col17a1Q07563 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC8.48□□□□□ -1.05
Col17a1Q07563 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 AC163731.1-201ENSMUST00000225696 3118 ntBASIC8.48□□□□□ -1.05
Col17a1Q07563 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Col17a1Q07563 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 AC022682.2-202ENSMUST00000224394 3943 ntBASIC8.48□□□□□ -1.05
Col17a1Q07563 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col17a1Q07563 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col17a1Q07563 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm37078-201ENSMUST00000193314 2009 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC8.47□□□□□ -1.05
Col17a1Q07563 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Col17a1Q07563 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC8.47□□□□□ -1.05
Col17a1Q07563 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Col17a1Q07563 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC8.47□□□□□ -1.05
Col17a1Q07563 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Col17a1Q07563 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col17a1Q07563 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC8.47□□□□□ -1.05
Col17a1Q07563 Mir669l-201ENSMUST00000103771 98 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm14878-201ENSMUST00000118167 293 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm14725-201ENSMUST00000120324 828 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm15225-201ENSMUST00000120449 1017 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm15038-201ENSMUST00000122144 296 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm22235-201ENSMUST00000157085 110 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm22588-201ENSMUST00000157510 140 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm17043-201ENSMUST00000164621 1283 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm24520-201ENSMUST00000179510 110 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Mir7014-201ENSMUST00000183853 63 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC8.47□□□□□ -1.05
Col17a1Q07563 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC8.47□□□□□ -1.05
Col17a1Q07563 Trbv9-201ENSMUST00000194494 290 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm44474-201ENSMUST00000196525 127 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm44074-201ENSMUST00000204562 337 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC8.47□□□□□ -1.05
Col17a1Q07563 AC154730.1-201ENSMUST00000227874 816 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col17a1Q07563 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Col17a1Q07563 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms