Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 AC154681.1-201ENSMUST00000225876 1735 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Cdx4Q07424 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Cdx4Q07424 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Cdx4Q07424 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm14925-201ENSMUST00000120611 438 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm4789-201ENSMUST00000121708 1216 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm11879-201ENSMUST00000121885 702 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Rps29-ps-201ENSMUST00000122083 172 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm15300-201ENSMUST00000122324 279 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm12833-201ENSMUST00000136112 477 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm23082-201ENSMUST00000157852 133 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm19560-201ENSMUST00000177510 514 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm9658-201ENSMUST00000182757 1012 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Mir3473e-201ENSMUST00000183932 110 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Cdx4Q07424 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC4.78□□□□□ -1.64
Cdx4Q07424 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm18952-201ENSMUST00000194471 846 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm43655-201ENSMUST00000197367 222 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm43476-201ENSMUST00000197873 405 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm8891-201ENSMUST00000198546 832 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm38574-201ENSMUST00000211855 640 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 AC154851.1-201ENSMUST00000221591 655 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 CT030166.1-201ENSMUST00000222654 357 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm15732-201ENSMUST00000079794 480 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm25810-201ENSMUST00000082752 108 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm24695-201ENSMUST00000083877 83 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Olfr654-201ENSMUST00000098173 1155 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC4.78□□□□□ -1.64
Cdx4Q07424 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm18796-201ENSMUST00000190440 1767 ntBASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx4Q07424 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdx4Q07424 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx4Q07424 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx4Q07424 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
Cdx4Q07424 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx4Q07424 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx4Q07424 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Cdx4Q07424 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Cdx4Q07424 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Cdx4Q07424 Gm38128-201ENSMUST00000192085 3250 ntBASIC4.77□□□□□ -1.65
Cdx4Q07424 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx4Q07424 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx4Q07424 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx4Q07424 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx4Q07424 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms