Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ufd1P70362 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ufd1P70362 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ufd1P70362 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.58□□□□□ -1.68
Ufd1P70362 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.58□□□□□ -1.68
Ufd1P70362 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.58□□□□□ -1.68
Ufd1P70362 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ufd1P70362 AC116726.1-201ENSMUST00000215028 3497 ntBASIC4.58□□□□□ -1.68
Ufd1P70362 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ufd1P70362 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ufd1P70362 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Ufd1P70362 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Ufd1P70362 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
Ufd1P70362 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Ufd1P70362 Gm25795-201ENSMUST00000104421 132 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC4.57□□□□□ -1.68
Ufd1P70362 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 Gm6654-201ENSMUST00000118950 348 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 Gm13503-201ENSMUST00000119017 446 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC4.57□□□□□ -1.68
Ufd1P70362 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC4.57□□□□□ -1.68
Ufd1P70362 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC4.57□□□□□ -1.68
Ufd1P70362 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 Gm15790-201ENSMUST00000161109 1251 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Ufd1P70362 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Ufd1P70362 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Ufd1P70362 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 Gm28116-201ENSMUST00000189064 387 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC4.57□□□□□ -1.68
Ufd1P70362 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC4.57□□□□□ -1.68
Ufd1P70362 Gm7492-201ENSMUST00000201745 725 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 Gm43124-201ENSMUST00000201878 278 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC4.57□□□□□ -1.68
Ufd1P70362 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC4.57□□□□□ -1.68
Ufd1P70362 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 Gm44163-201ENSMUST00000205140 475 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC4.57□□□□□ -1.68
Ufd1P70362 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC4.57□□□□□ -1.68
Ufd1P70362 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC4.57□□□□□ -1.68
Ufd1P70362 Gm44603-201ENSMUST00000206820 367 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 Gm20946-201ENSMUST00000212367 461 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Ufd1P70362 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 AC153357.1-201ENSMUST00000219190 482 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC4.57□□□□□ -1.68
Ufd1P70362 AC124826.1-201ENSMUST00000221651 325 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 AC154851.2-201ENSMUST00000222172 644 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 AC161609.1-201ENSMUST00000225878 474 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Ufd1P70362 Mir138-2-201ENSMUST00000083578 71 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 n-R5s161-201ENSMUST00000083728 114 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Ufd1P70362 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Ufd1P70362 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ufd1P70362 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Ufd1P70362 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ufd1P70362 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ufd1P70362 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ufd1P70362 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.57□□□□□ -1.68
Ufd1P70362 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ufd1P70362 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ufd1P70362 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Ufd1P70362 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ufd1P70362 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Ufd1P70362 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ufd1P70362 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ufd1P70362 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ufd1P70362 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ufd1P70362 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ufd1P70362 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.56□□□□□ -1.68
Ufd1P70362 AC151904.4-201ENSMUST00000219868 1319 ntBASIC4.56□□□□□ -1.68
Ufd1P70362 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.56□□□□□ -1.68
Ufd1P70362 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ufd1P70362 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ufd1P70362 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ufd1P70362 Gm14788-201ENSMUST00000119457 375 ntBASIC4.56□□□□□ -1.68
Ufd1P70362 Gm15181-201ENSMUST00000120142 177 ntBASIC4.56□□□□□ -1.68
Ufd1P70362 Gm12369-201ENSMUST00000121343 942 ntBASIC4.56□□□□□ -1.68
Ufd1P70362 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC4.56□□□□□ -1.68
Ufd1P70362 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC4.56□□□□□ -1.68
Ufd1P70362 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Ufd1P70362 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Ufd1P70362 Gm25013-201ENSMUST00000158402 128 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms