Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm23437-201ENSMUST00000104036 127 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Igkv13-87-201ENSMUST00000114214 286 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm7821-201ENSMUST00000117111 788 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm12635-201ENSMUST00000117285 752 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm15105-201ENSMUST00000117777 204 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm9311-201ENSMUST00000118042 1269 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm7421-201ENSMUST00000119298 639 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm11890-201ENSMUST00000119585 417 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Amd-ps1-201ENSMUST00000120127 994 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm12104-201ENSMUST00000120359 979 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm7365-201ENSMUST00000120877 639 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm13865-201ENSMUST00000120957 865 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm14411-201ENSMUST00000121798 914 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm22235-201ENSMUST00000157085 110 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm22755-201ENSMUST00000157143 100 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm22915-201ENSMUST00000157615 136 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm25667-201ENSMUST00000157701 275 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm22733-201ENSMUST00000158094 91 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm17030-201ENSMUST00000167016 393 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm20453-201ENSMUST00000173968 226 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm22646-201ENSMUST00000175130 115 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm22702-201ENSMUST00000175372 69 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.84□□□□□ -1.47
Sf3b6P59708 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm26528-201ENSMUST00000181965 283 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Mir7669-201ENSMUST00000183442 58 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm27684-201ENSMUST00000183778 80 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm27596-201ENSMUST00000185061 83 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm18501-201ENSMUST00000185363 664 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm30517-201ENSMUST00000197350 772 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Ighv8-15-201ENSMUST00000197770 294 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm19457-201ENSMUST00000200995 448 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm3189-201ENSMUST00000205595 832 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm2975-201ENSMUST00000209710 820 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm18226-201ENSMUST00000215261 521 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC5.84□□□□□ -1.47
Sf3b6P59708 AC102369.1-201ENSMUST00000218415 373 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm8681-201ENSMUST00000219115 618 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 AC170810.3-201ENSMUST00000226177 374 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 AC166344.2-201ENSMUST00000226747 374 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm24623-201ENSMUST00000082616 194 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Mir135a-1-201ENSMUST00000083473 90 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm25189-201ENSMUST00000083911 164 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm10540-201ENSMUST00000097581 276 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm37033-201ENSMUST00000193199 7350 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Sf3b6P59708 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Sf3b6P59708 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.84□□□□□ -1.48
Sf3b6P59708 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.84□□□□□ -1.48
Sf3b6P59708 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sf3b6P59708 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sf3b6P59708 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sf3b6P59708 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sf3b6P59708 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
Sf3b6P59708 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sf3b6P59708 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC5.83□□□□□ -1.48
Sf3b6P59708 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sf3b6P59708 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sf3b6P59708 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms