Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.26□□□□□ -1.57
Sox3P53784 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.26□□□□□ -1.57
Sox3P53784 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC5.26□□□□□ -1.57
Sox3P53784 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.26□□□□□ -1.57
Sox3P53784 Gm44053-201ENSMUST00000203364 929 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.26□□□□□ -1.57
Sox3P53784 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.26□□□□□ -1.57
Sox3P53784 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Sox3P53784 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.26□□□□□ -1.57
Sox3P53784 AC211878.5-201ENSMUST00000221697 409 ntBASIC5.26□□□□□ -1.57
Sox3P53784 AC131117.2-203ENSMUST00000225886 950 ntBASIC5.26□□□□□ -1.57
Sox3P53784 AC116724.1-201ENSMUST00000227900 972 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Sox3P53784 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Sox3P53784 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Sox3P53784 Gm23514-201ENSMUST00000082827 130 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.26□□□□□ -1.57
Sox3P53784 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Sox3P53784 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Sox3P53784 Gm37082-201ENSMUST00000192629 1927 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Sox3P53784 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.26□□□□□ -1.57
Sox3P53784 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Sox3P53784 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Sox3P53784 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.26□□□□□ -1.57
Sox3P53784 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Sox3P53784 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Sox3P53784 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Sox3P53784 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sox3P53784 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sox3P53784 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Sox3P53784 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.25□□□□□ -1.57
Sox3P53784 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Sox3P53784 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sox3P53784 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.25□□□□□ -1.57
Sox3P53784 Gm16128-201ENSMUST00000117855 626 ntBASIC5.25□□□□□ -1.57
Sox3P53784 Gm14791-201ENSMUST00000119061 1166 ntBASIC5.25□□□□□ -1.57
Sox3P53784 H3f3c-201ENSMUST00000119459 411 ntBASIC5.25□□□□□ -1.57
Sox3P53784 Gm12488-201ENSMUST00000122449 499 ntBASIC5.25□□□□□ -1.57
Sox3P53784 Gm22160-201ENSMUST00000158405 328 ntBASIC5.25□□□□□ -1.57
Sox3P53784 Scarna10-201ENSMUST00000158992 325 ntBASIC5.25□□□□□ -1.57
Sox3P53784 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sox3P53784 Gm6223-201ENSMUST00000178436 871 ntBASIC5.25□□□□□ -1.57
Sox3P53784 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Sox3P53784 Gm28149-201ENSMUST00000187102 378 ntBASIC5.25□□□□□ -1.57
Sox3P53784 Gm28768-201ENSMUST00000189034 378 ntBASIC5.25□□□□□ -1.57
Sox3P53784 Supt4b-201ENSMUST00000214434 351 ntBASIC5.25□□□□□ -1.57
Sox3P53784 Gm19936-201ENSMUST00000216414 838 ntBASIC5.25□□□□□ -1.57
Sox3P53784 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.25□□□□□ -1.57
Sox3P53784 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.25□□□□□ -1.57
Sox3P53784 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.25□□□□□ -1.57
Sox3P53784 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.25□□□□□ -1.57
Sox3P53784 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sox3P53784 Gm26063-201ENSMUST00000083378 107 ntBASIC5.25□□□□□ -1.57
Sox3P53784 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sox3P53784 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sox3P53784 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Sox3P53784 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sox3P53784 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Sox3P53784 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sox3P53784 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Sox3P53784 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sox3P53784 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Sox3P53784 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.25□□□□□ -1.57
Sox3P53784 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.24□□□□□ -1.57
Sox3P53784 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Sox3P53784 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
Sox3P53784 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.24□□□□□ -1.57
Sox3P53784 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.24□□□□□ -1.57
Sox3P53784 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
Sox3P53784 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
Sox3P53784 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.24□□□□□ -1.57
Sox3P53784 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Sox3P53784 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Gm15660-201ENSMUST00000118997 478 ntBASIC5.24□□□□□ -1.57
Sox3P53784 Gm15428-201ENSMUST00000121352 333 ntBASIC5.24□□□□□ -1.57
Sox3P53784 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms