Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm19368-201ENSMUST00000221258 4424 ntBASIC8.14□□□□□ -1.11
Cux1P53564 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cux1P53564 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cux1P53564 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Cux1P53564 Gm24235-201ENSMUST00000104319 129 ntBASIC8.13□□□□□ -1.11
Cux1P53564 Gm11447-201ENSMUST00000118983 858 ntBASIC8.13□□□□□ -1.11
Cux1P53564 Gm15828-201ENSMUST00000119911 522 ntBASIC8.13□□□□□ -1.11
Cux1P53564 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cux1P53564 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC8.13□□□□□ -1.11
Cux1P53564 Gm6542-201ENSMUST00000153606 772 ntBASIC8.13□□□□□ -1.11
Cux1P53564 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cux1P53564 Gm27875-201ENSMUST00000184425 123 ntBASIC8.13□□□□□ -1.11
Cux1P53564 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC8.13□□□□□ -1.11
Cux1P53564 Gm32526-201ENSMUST00000221878 981 ntBASIC8.13□□□□□ -1.11
Cux1P53564 AC112142.1-206ENSMUST00000228136 982 ntBASIC8.13□□□□□ -1.11
Cux1P53564 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Cux1P53564 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC8.13□□□□□ -1.11
Cux1P53564 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cux1P53564 AC121094.1-201ENSMUST00000224766 1345 ntBASIC8.13□□□□□ -1.11
Cux1P53564 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cux1P53564 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cux1P53564 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cux1P53564 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cux1P53564 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cux1P53564 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Cux1P53564 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cux1P53564 Gm7529-201ENSMUST00000213753 1897 ntBASIC8.13□□□□□ -1.11
Cux1P53564 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Cux1P53564 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Cux1P53564 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cux1P53564 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Cux1P53564 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cux1P53564 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Cux1P53564 Gm12423-201ENSMUST00000118334 135 ntBASIC8.13□□□□□ -1.11
Cux1P53564 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cux1P53564 Gm7840-201ENSMUST00000122086 533 ntBASIC8.13□□□□□ -1.11
Cux1P53564 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC8.13□□□□□ -1.11
Cux1P53564 Mir6410-201ENSMUST00000184204 104 ntBASIC8.13□□□□□ -1.11
Cux1P53564 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Cux1P53564 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cux1P53564 Vmn1r82-202ENSMUST00000191002 918 ntBASIC8.13□□□□□ -1.11
Cux1P53564 Gm42643-201ENSMUST00000200504 279 ntBASIC8.13□□□□□ -1.11
Cux1P53564 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC8.13□□□□□ -1.11
Cux1P53564 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC8.13□□□□□ -1.11
Cux1P53564 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Cux1P53564 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Cux1P53564 AC158955.1-201ENSMUST00000227140 385 ntBASIC8.13□□□□□ -1.11
Cux1P53564 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Cux1P53564 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cux1P53564 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Cux1P53564 AC170999.1-201ENSMUST00000226359 1585 ntBASIC8.12□□□□□ -1.11
Cux1P53564 Gm24170-201ENSMUST00000104124 133 ntBASIC8.12□□□□□ -1.11
Cux1P53564 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Cux1P53564 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC8.12□□□□□ -1.11
Cux1P53564 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cux1P53564 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cux1P53564 Gm21850-201ENSMUST00000179792 359 ntBASIC8.12□□□□□ -1.11
Cux1P53564 Mir6943-201ENSMUST00000185186 66 ntBASIC8.12□□□□□ -1.11
Cux1P53564 Gm37444-201ENSMUST00000193605 439 ntBASIC8.12□□□□□ -1.11
Cux1P53564 Gm43418-201ENSMUST00000201334 428 ntBASIC8.12□□□□□ -1.11
Cux1P53564 Gm8999-201ENSMUST00000204951 969 ntBASIC8.12□□□□□ -1.11
Cux1P53564 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC8.12□□□□□ -1.11
Cux1P53564 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC8.12□□□□□ -1.11
Cux1P53564 Gm19186-201ENSMUST00000219922 333 ntBASIC8.12□□□□□ -1.11
Cux1P53564 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Cux1P53564 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC8.12□□□□□ -1.11
Cux1P53564 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cux1P53564 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC8.12□□□□□ -1.11
Cux1P53564 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
Cux1P53564 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cux1P53564 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cux1P53564 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cux1P53564 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cux1P53564 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Cux1P53564 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Cux1P53564 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Cux1P53564 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Cux1P53564 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cux1P53564 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cux1P53564 Gm44668-201ENSMUST00000207911 3265 ntBASIC8.11□□□□□ -1.11
Cux1P53564 Gm13733-201ENSMUST00000117290 535 ntBASIC8.11□□□□□ -1.11
Cux1P53564 Gm8202-201ENSMUST00000117682 310 ntBASIC8.11□□□□□ -1.11
Cux1P53564 Gm15297-201ENSMUST00000117795 290 ntBASIC8.11□□□□□ -1.11
Cux1P53564 Gm14352-201ENSMUST00000119250 449 ntBASIC8.11□□□□□ -1.11
Cux1P53564 Gm15227-201ENSMUST00000121844 399 ntBASIC8.11□□□□□ -1.11
Cux1P53564 n-R5s98-201ENSMUST00000122549 119 ntBASIC8.11□□□□□ -1.11
Cux1P53564 Gm3362-201ENSMUST00000148102 466 ntBASIC8.11□□□□□ -1.11
Cux1P53564 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cux1P53564 Gm22726-201ENSMUST00000158089 179 ntBASIC8.11□□□□□ -1.11
Cux1P53564 Mir6416-201ENSMUST00000183664 117 ntBASIC8.11□□□□□ -1.11
Cux1P53564 Gm2497-201ENSMUST00000189539 601 ntBASIC8.11□□□□□ -1.11
Cux1P53564 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC8.11□□□□□ -1.11
Cux1P53564 Gm32453-201ENSMUST00000204183 456 ntBASIC8.11□□□□□ -1.11
Cux1P53564 Gm45628-201ENSMUST00000210849 274 ntBASIC8.11□□□□□ -1.11
Cux1P53564 Gm8264-201ENSMUST00000217801 465 ntBASIC8.11□□□□□ -1.11
Cux1P53564 Gm8158-201ENSMUST00000219220 465 ntBASIC8.11□□□□□ -1.11
Cux1P53564 Gm8112-201ENSMUST00000219637 465 ntBASIC8.11□□□□□ -1.11
Cux1P53564 Gm2645-201ENSMUST00000223516 547 ntBASIC8.11□□□□□ -1.11
Cux1P53564 AC161269.1-201ENSMUST00000228426 318 ntBASIC8.11□□□□□ -1.11
Cux1P53564 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms