Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm42452-201ENSMUST00000199749 617 ntBASIC5.18□□□□□ -1.58
Cdx2P43241 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.18□□□□□ -1.58
Cdx2P43241 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.18□□□□□ -1.58
Cdx2P43241 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.18□□□□□ -1.58
Cdx2P43241 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC5.18□□□□□ -1.58
Cdx2P43241 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.18□□□□□ -1.58
Cdx2P43241 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Cdx2P43241 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Cdx2P43241 Gm23626-201ENSMUST00000082458 133 ntBASIC5.18□□□□□ -1.58
Cdx2P43241 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.18□□□□□ -1.58
Cdx2P43241 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx2P43241 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.18□□□□□ -1.58
Cdx2P43241 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx2P43241 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.18□□□□□ -1.58
Cdx2P43241 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Cdx2P43241 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Cdx2P43241 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx2P43241 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.18□□□□□ -1.58
Cdx2P43241 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Cdx2P43241 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx2P43241 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx2P43241 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Cdx2P43241 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx2P43241 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx2P43241 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Cdx2P43241 CT025675.1-201ENSMUST00000228171 1567 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx2P43241 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx2P43241 Gm23692-201ENSMUST00000101881 160 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Cdx2P43241 Gm24170-201ENSMUST00000104124 133 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Gm24350-201ENSMUST00000104163 133 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Gm15670-201ENSMUST00000117740 447 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Gm16007-201ENSMUST00000117837 286 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Gm12850-201ENSMUST00000119210 436 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Gm16345-201ENSMUST00000146065 158 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Gm22916-201ENSMUST00000157616 119 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Gm23700-201ENSMUST00000158842 102 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx2P43241 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cdx2P43241 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Gm29474-201ENSMUST00000187688 379 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.17□□□□□ -1.58
Cdx2P43241 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx2P43241 Gm43444-201ENSMUST00000198123 291 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Mir409-201ENSMUST00000198153 79 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Gm43408-201ENSMUST00000198263 440 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Gm44463-201ENSMUST00000198895 137 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.17□□□□□ -1.58
Cdx2P43241 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.17□□□□□ -1.58
Cdx2P43241 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Gm23508-201ENSMUST00000083079 72 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Gm22741-201ENSMUST00000083438 165 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 AC192333.5-201ENSMUST00000224620 2350 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cdx2P43241 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx2P43241 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx2P43241 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cdx2P43241 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Cdx2P43241 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.17□□□□□ -1.58
Cdx2P43241 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
Cdx2P43241 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
Cdx2P43241 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx2P43241 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx2P43241 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cdx2P43241 Naip3-201ENSMUST00000118082 4208 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
Cdx2P43241 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.17□□□□□ -1.58
Cdx2P43241 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cdx2P43241 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.17□□□□□ -1.58
Cdx2P43241 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdx2P43241 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx2P43241 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx2P43241 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx2P43241 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx2P43241 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx2P43241 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx2P43241 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx2P43241 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdx2P43241 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Cdx2P43241 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx2P43241 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx2P43241 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx2P43241 Gm23879-201ENSMUST00000116874 126 ntBASIC5.16□□□□□ -1.58
Cdx2P43241 Gm12641-201ENSMUST00000117874 985 ntBASIC5.16□□□□□ -1.58
Cdx2P43241 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.16□□□□□ -1.58
Cdx2P43241 Gm12322-201ENSMUST00000121605 389 ntBASIC5.16□□□□□ -1.58
Cdx2P43241 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx2P43241 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.16□□□□□ -1.58
Cdx2P43241 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.16□□□□□ -1.58
Cdx2P43241 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms