Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm14769-201ENSMUST00000118590 432 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.18□□□□□ -1.58
Sftpa1P35242 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm23327-201ENSMUST00000157420 78 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm26069-201ENSMUST00000157497 277 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm22650-201ENSMUST00000175138 105 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm9457-201ENSMUST00000180176 372 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm27754-201ENSMUST00000183340 126 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm27541-201ENSMUST00000184078 122 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm28683-201ENSMUST00000187134 615 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm28840-205ENSMUST00000189320 615 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm28835-203ENSMUST00000190062 615 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm9238-201ENSMUST00000196181 329 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Sftpa1P35242 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sftpa1P35242 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Sftpa1P35242 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm36378-201ENSMUST00000201709 388 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm45032-201ENSMUST00000205375 520 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Sftpa1P35242 AC124408.1-201ENSMUST00000228938 707 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm4822-201ENSMUST00000077551 479 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm10145-201ENSMUST00000077776 462 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Sftpa1P35242 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm10705-201ENSMUST00000098980 461 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sftpa1P35242 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm43319-201ENSMUST00000198036 2270 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sftpa1P35242 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sftpa1P35242 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sftpa1P35242 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.18□□□□□ -1.58
Sftpa1P35242 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.17□□□□□ -1.58
Sftpa1P35242 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sftpa1P35242 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sftpa1P35242 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sftpa1P35242 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sftpa1P35242 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sftpa1P35242 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.17□□□□□ -1.58
Sftpa1P35242 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sftpa1P35242 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sftpa1P35242 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm12654-201ENSMUST00000120387 587 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm22600-201ENSMUST00000157598 269 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm28871-201ENSMUST00000186191 687 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm18698-201ENSMUST00000192327 668 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm29747-201ENSMUST00000194764 585 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm18427-201ENSMUST00000195422 515 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm43779-201ENSMUST00000196691 829 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm42663-201ENSMUST00000199883 351 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm44003-201ENSMUST00000203024 490 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm44259-201ENSMUST00000204996 298 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm5735-201ENSMUST00000207053 167 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm44623-201ENSMUST00000207934 434 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 Gm19936-201ENSMUST00000216414 838 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.17□□□□□ -1.58
Sftpa1P35242 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sftpa1P35242 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sftpa1P35242 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sftpa1P35242 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Sftpa1P35242 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 117.1 ms