Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm25774-201ENSMUST00000116717 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm22102-201ENSMUST00000116730 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm23177-201ENSMUST00000116784 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm24193-201ENSMUST00000116801 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm24744-201ENSMUST00000116833 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm24427-201ENSMUST00000116896 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm22346-201ENSMUST00000116918 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm23606-201ENSMUST00000116938 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm22029-201ENSMUST00000116940 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm26298-201ENSMUST00000116956 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm23844-201ENSMUST00000116959 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm24484-201ENSMUST00000117009 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm25347-201ENSMUST00000117026 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm22112-201ENSMUST00000117032 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm15670-201ENSMUST00000117740 447 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm15971-201ENSMUST00000119372 211 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm15171-201ENSMUST00000122191 334 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC6.04□□□□□ -1.44
Col2a1P28481 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Col2a1P28481 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm22991-201ENSMUST00000178126 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm25754-201ENSMUST00000178653 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm22419-201ENSMUST00000178780 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm24802-201ENSMUST00000178897 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm25208-201ENSMUST00000178964 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm24567-201ENSMUST00000179294 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm23943-201ENSMUST00000179712 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm25228-201ENSMUST00000180121 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm23304-201ENSMUST00000180209 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm20203-201ENSMUST00000192352 332 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm42459-201ENSMUST00000199679 742 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm18127-201ENSMUST00000208479 725 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Supt4b-201ENSMUST00000214434 351 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC6.04□□□□□ -1.44
Col2a1P28481 Gm9512-201ENSMUST00000223112 497 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Col2a1P28481 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col2a1P28481 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col2a1P28481 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col2a1P28481 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col2a1P28481 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col2a1P28481 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col2a1P28481 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col2a1P28481 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.04□□□□□ -1.44
Col2a1P28481 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Col2a1P28481 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col2a1P28481 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col2a1P28481 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col2a1P28481 Gm15560-201ENSMUST00000117107 643 ntBASIC6.03□□□□□ -1.44
Col2a1P28481 Gm14388-201ENSMUST00000118119 477 ntBASIC6.03□□□□□ -1.44
Col2a1P28481 Gm14046-201ENSMUST00000119389 509 ntBASIC6.03□□□□□ -1.44
Col2a1P28481 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.03□□□□□ -1.44
Col2a1P28481 Gm13452-201ENSMUST00000120896 1097 ntBASIC6.03□□□□□ -1.44
Col2a1P28481 Gm24175-201ENSMUST00000158931 129 ntBASIC6.03□□□□□ -1.44
Col2a1P28481 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col2a1P28481 Olfr331-202ENSMUST00000170501 957 ntBASIC6.03□□□□□ -1.44
Col2a1P28481 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col2a1P28481 Gm8480-201ENSMUST00000190350 698 ntBASIC6.03□□□□□ -1.44
Col2a1P28481 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col2a1P28481 Gm42663-201ENSMUST00000199883 351 ntBASIC6.03□□□□□ -1.44
Col2a1P28481 Gm44412-201ENSMUST00000203018 294 ntBASIC6.03□□□□□ -1.44
Col2a1P28481 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC6.03□□□□□ -1.44
Col2a1P28481 Gm32453-201ENSMUST00000204183 456 ntBASIC6.03□□□□□ -1.44
Col2a1P28481 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC6.03□□□□□ -1.44
Col2a1P28481 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC6.03□□□□□ -1.44
Col2a1P28481 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC6.03□□□□□ -1.44
Col2a1P28481 Gm7040-201ENSMUST00000223271 443 ntBASIC6.03□□□□□ -1.44
Col2a1P28481 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col2a1P28481 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col2a1P28481 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col2a1P28481 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col2a1P28481 Mir17-201ENSMUST00000083574 84 ntBASIC6.03□□□□□ -1.44
Col2a1P28481 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col2a1P28481 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col2a1P28481 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col2a1P28481 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Col2a1P28481 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col2a1P28481 Gm45177-201ENSMUST00000209104 2307 ntBASIC6.03□□□□□ -1.44
Col2a1P28481 Gm45324-201ENSMUST00000211193 5638 ntBASIC6.03□□□□□ -1.44
Col2a1P28481 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col2a1P28481 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Col2a1P28481 n-R5s82-201ENSMUST00000104213 109 ntBASIC6.02□□□□□ -1.44
Col2a1P28481 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
Col2a1P28481 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.44
Col2a1P28481 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.44
Col2a1P28481 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC6.02□□□□□ -1.44
Col2a1P28481 Gm23534-201ENSMUST00000157539 97 ntBASIC6.02□□□□□ -1.44
Col2a1P28481 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.02□□□□□ -1.44
Col2a1P28481 Gm9457-201ENSMUST00000180176 372 ntBASIC6.02□□□□□ -1.44
Col2a1P28481 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC6.02□□□□□ -1.44
Col2a1P28481 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
Col2a1P28481 Gm37581-201ENSMUST00000192371 988 ntBASIC6.02□□□□□ -1.44
Col2a1P28481 Gm37181-201ENSMUST00000192513 1727 ntBASIC6.02□□□□□ -1.44
Col2a1P28481 Gm18864-201ENSMUST00000194518 1051 ntBASIC6.02□□□□□ -1.44
Col2a1P28481 Gm43524-201ENSMUST00000197278 298 ntBASIC6.02□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms