Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Cdx1P18111 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Cdx1P18111 Gm38181-201ENSMUST00000181357 720 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Gm26970-201ENSMUST00000182990 964 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC4.53□□□□□ -1.68
Cdx1P18111 Gm28080-201ENSMUST00000188552 722 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Gm29551-201ENSMUST00000190913 698 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Gm8869-201ENSMUST00000195222 947 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Gm43561-201ENSMUST00000199866 448 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC4.53□□□□□ -1.68
Cdx1P18111 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4.53□□□□□ -1.68
Cdx1P18111 Gm45850-201ENSMUST00000212536 338 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Gm10688-201ENSMUST00000214985 520 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC4.53□□□□□ -1.68
Cdx1P18111 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC4.53□□□□□ -1.68
Cdx1P18111 CT010431.1-201ENSMUST00000221249 1080 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 AC107369.1-201ENSMUST00000227373 860 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx1P18111 Snora44-201ENSMUST00000082670 129 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx1P18111 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Cdx1P18111 Gm44751-201ENSMUST00000208302 4387 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Cdx1P18111 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx1P18111 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Cdx1P18111 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx1P18111 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Gm4011-201ENSMUST00000174657 2555 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.53□□□□□ -1.69
Cdx1P18111 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.53□□□□□ -1.69
Cdx1P18111 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx1P18111 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cdx1P18111 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Cdx1P18111 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cdx1P18111 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx1P18111 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx1P18111 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx1P18111 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx1P18111 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx1P18111 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cdx1P18111 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx1P18111 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cdx1P18111 Gm20486-201ENSMUST00000101544 128 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Gm13428-201ENSMUST00000117540 365 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Gm12638-201ENSMUST00000119531 298 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Gm12379-201ENSMUST00000119607 391 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Gm13506-201ENSMUST00000120391 1083 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Gm11852-201ENSMUST00000120806 222 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Gm25106-201ENSMUST00000122672 134 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC4.52□□□□□ -1.69
Cdx1P18111 Gm23279-201ENSMUST00000157912 97 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Cdx1P18111 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Cdx1P18111 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC4.52□□□□□ -1.69
Cdx1P18111 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx1P18111 Mir7037-201ENSMUST00000184414 65 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Mir7674-201ENSMUST00000184964 63 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx1P18111 Gm29556-201ENSMUST00000187591 696 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx1P18111 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.52□□□□□ -1.69
Cdx1P18111 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx1P18111 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC4.52□□□□□ -1.69
Cdx1P18111 n-TStga1-201ENSMUST00000199903 109 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Gm44360-201ENSMUST00000200081 82 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Cdx1P18111 Gm45269-201ENSMUST00000210359 282 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Gm45473-201ENSMUST00000211452 616 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Gm4510-201ENSMUST00000218265 427 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 AC156037.1-201ENSMUST00000221133 127 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 AC125543.3-201ENSMUST00000221991 126 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
Cdx1P18111 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx1P18111 n-R5s161-201ENSMUST00000083728 114 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cdx1P18111 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx1P18111 Gm16270-201ENSMUST00000160327 3238 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx1P18111 Gm37735-201ENSMUST00000193995 1406 ntBASIC4.52□□□□□ -1.69
Cdx1P18111 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cdx1P18111 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx1P18111 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cdx1P18111 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cdx1P18111 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
Cdx1P18111 Gm42540-201ENSMUST00000200319 2008 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Cdx1P18111 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx1P18111 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx1P18111 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Cdx1P18111 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Cdx1P18111 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Cdx1P18111 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx1P18111 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Cdx1P18111 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx1P18111 Gm18493-201ENSMUST00000192084 1612 ntBASIC4.51□□□□□ -1.69
Cdx1P18111 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms