Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TnfP06804 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.68□□□□□ -1.5
TnfP06804 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TnfP06804 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TnfP06804 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TnfP06804 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TnfP06804 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TnfP06804 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TnfP06804 Gm10936-201ENSMUST00000105264 252 ntBASIC5.67□□□□□ -1.5
TnfP06804 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
TnfP06804 H3f3c-201ENSMUST00000119459 411 ntBASIC5.67□□□□□ -1.5
TnfP06804 Gm12189-201ENSMUST00000119779 912 ntBASIC5.67□□□□□ -1.5
TnfP06804 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.67□□□□□ -1.5
TnfP06804 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TnfP06804 Gm22214-201ENSMUST00000157563 172 ntBASIC5.67□□□□□ -1.5
TnfP06804 Gm22160-201ENSMUST00000158405 328 ntBASIC5.67□□□□□ -1.5
TnfP06804 Gm15838-201ENSMUST00000161575 180 ntBASIC5.67□□□□□ -1.5
TnfP06804 Gm44370-201ENSMUST00000175436 112 ntBASIC5.67□□□□□ -1.5
TnfP06804 Gm29596-201ENSMUST00000185710 385 ntBASIC5.67□□□□□ -1.5
TnfP06804 Gm34176-201ENSMUST00000192621 474 ntBASIC5.67□□□□□ -1.5
TnfP06804 Gm29813-201ENSMUST00000195856 447 ntBASIC5.67□□□□□ -1.5
TnfP06804 Gm9173-201ENSMUST00000198054 400 ntBASIC5.67□□□□□ -1.5
TnfP06804 Gm44412-201ENSMUST00000203018 294 ntBASIC5.67□□□□□ -1.5
TnfP06804 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC5.67□□□□□ -1.5
TnfP06804 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.67□□□□□ -1.5
TnfP06804 Gm45070-201ENSMUST00000208100 246 ntBASIC5.67□□□□□ -1.5
TnfP06804 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.67□□□□□ -1.5
TnfP06804 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.67□□□□□ -1.5
TnfP06804 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.67□□□□□ -1.5
TnfP06804 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.67□□□□□ -1.5
TnfP06804 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.67□□□□□ -1.5
TnfP06804 Gm4963-201ENSMUST00000072718 378 ntBASIC5.67□□□□□ -1.5
TnfP06804 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.67□□□□□ -1.5
TnfP06804 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.67□□□□□ -1.5
TnfP06804 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TnfP06804 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
TnfP06804 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TnfP06804 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TnfP06804 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TnfP06804 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TnfP06804 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TnfP06804 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.67□□□□□ -1.5
TnfP06804 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.67□□□□□ -1.5
TnfP06804 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TnfP06804 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TnfP06804 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TnfP06804 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TnfP06804 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TnfP06804 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TnfP06804 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
TnfP06804 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TnfP06804 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.66□□□□□ -1.5
TnfP06804 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TnfP06804 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TnfP06804 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.66□□□□□ -1.5
TnfP06804 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
TnfP06804 Gm23274-201ENSMUST00000104056 130 ntBASIC5.66□□□□□ -1.5
TnfP06804 Gm24170-201ENSMUST00000104124 133 ntBASIC5.66□□□□□ -1.5
TnfP06804 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
TnfP06804 Gm11550-201ENSMUST00000118210 699 ntBASIC5.66□□□□□ -1.5
TnfP06804 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.66□□□□□ -1.5
TnfP06804 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.66□□□□□ -1.5
TnfP06804 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.66□□□□□ -1.5
TnfP06804 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TnfP06804 Gm45276-201ENSMUST00000209549 1086 ntBASIC5.66□□□□□ -1.5
TnfP06804 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.66□□□□□ -1.5
TnfP06804 AC154450.1-201ENSMUST00000220911 485 ntBASIC5.66□□□□□ -1.5
TnfP06804 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TnfP06804 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.66□□□□□ -1.5
TnfP06804 Gm4822-201ENSMUST00000077551 479 ntBASIC5.66□□□□□ -1.5
TnfP06804 Mir31-201ENSMUST00000083474 106 ntBASIC5.66□□□□□ -1.5
TnfP06804 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.66□□□□□ -1.5
TnfP06804 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TnfP06804 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.66□□□□□ -1.5
TnfP06804 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TnfP06804 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TnfP06804 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TnfP06804 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TnfP06804 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
TnfP06804 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
TnfP06804 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms