Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Gm13363-201ENSMUST00000122008 522 ntBASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 AC160031.1-201ENSMUST00000219914 522 ntBASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Gm22826-201ENSMUST00000083774 165 ntBASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 AC151734.1-201ENSMUST00000227023 1740 ntBASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Gm17137-201ENSMUST00000164106 4371 ntBASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Gm37087-201ENSMUST00000192966 3309 ntBASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Gm37752-201ENSMUST00000193494 3309 ntBASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 AC093022.3-201ENSMUST00000226569 1926 ntBASIC9.75□□□□□ -0.85
Ccdc180J3QNE4 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm7657-201ENSMUST00000118851 666 ntBASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm37884-201ENSMUST00000191857 818 ntBASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm36986-201ENSMUST00000195320 353 ntBASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm37973-201ENSMUST00000195767 1289 ntBASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Ap3m1-208ENSMUST00000224016 764 ntBASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Mir27a-201ENSMUST00000083510 87 ntBASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm24763-201ENSMUST00000083688 190 ntBASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm24578-201ENSMUST00000103970 129 ntBASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm14995-201ENSMUST00000117135 391 ntBASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm8202-201ENSMUST00000117682 310 ntBASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm3931-201ENSMUST00000119038 455 ntBASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm14732-201ENSMUST00000121372 545 ntBASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm15740-201ENSMUST00000159703 1292 ntBASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm2147-201ENSMUST00000193588 639 ntBASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm44074-201ENSMUST00000204562 337 ntBASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Gm8137-201ENSMUST00000218997 463 ntBASIC9.74□□□□□ -0.85
Ccdc180J3QNE4 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 Gm15170-201ENSMUST00000121593 2023 ntBASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 Gm42496-201ENSMUST00000197976 3241 ntBASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 Gm5285-201ENSMUST00000193089 666 ntBASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 Gm38125-201ENSMUST00000194136 3438 ntBASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccdc180J3QNE4 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 Gm23274-201ENSMUST00000104056 130 ntBASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 Gm13679-201ENSMUST00000118678 484 ntBASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 Gm5834-201ENSMUST00000126680 1026 ntBASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 Gm27551-201ENSMUST00000184258 77 ntBASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 CT030124.1-201ENSMUST00000217130 235 ntBASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 AC125543.1-201ENSMUST00000222778 101 ntBASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 AC163646.1-201ENSMUST00000227704 397 ntBASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Ccdc180J3QNE4 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms