Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm2976-201ENSMUST00000160362 513 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm20637-201ENSMUST00000175715 462 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm20648-201ENSMUST00000175815 328 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm4904-201ENSMUST00000178243 1195 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Mir6769b-201ENSMUST00000184793 60 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm28560-201ENSMUST00000186091 315 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm28334-201ENSMUST00000186653 315 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm28495-201ENSMUST00000188452 315 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm28232-201ENSMUST00000188683 315 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm28481-201ENSMUST00000189231 315 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm28620-201ENSMUST00000190463 439 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm29059-201ENSMUST00000191534 315 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm37765-201ENSMUST00000192395 315 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm37237-201ENSMUST00000192893 315 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm36968-201ENSMUST00000193737 315 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm38290-201ENSMUST00000195238 315 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm38109-201ENSMUST00000195386 181 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm43344-201ENSMUST00000198723 1229 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm43015-201ENSMUST00000199087 565 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm43850-201ENSMUST00000202021 578 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm9367-201ENSMUST00000205703 546 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm45725-201ENSMUST00000212962 337 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 AC154323.2-201ENSMUST00000226557 1151 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm22977-201ENSMUST00000082615 107 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm24254-201ENSMUST00000083702 104 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm13310-201ENSMUST00000120962 1381 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Gm43369-201ENSMUST00000196373 1552 ntBASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Pcdh1F7BJK1 AC134577.3-201ENSMUST00000226490 3000 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm16082-201ENSMUST00000115992 377 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm15108-201ENSMUST00000116160 803 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Snord88a-201ENSMUST00000116723 90 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm13000-201ENSMUST00000120937 496 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm3091-201ENSMUST00000163408 484 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm8224-201ENSMUST00000166178 497 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm19560-201ENSMUST00000177510 514 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm6489-201ENSMUST00000178167 696 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm21877-201ENSMUST00000185640 694 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm9114-201ENSMUST00000188558 997 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm37620-201ENSMUST00000192910 501 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm44342-201ENSMUST00000196874 129 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm21006-201ENSMUST00000196930 667 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm17824-201ENSMUST00000197690 805 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm44403-201ENSMUST00000198554 129 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm44383-201ENSMUST00000198940 129 ntBASIC5.74□□□□□ -1.49
Pcdh1F7BJK1 Gm29778-201ENSMUST00000201667 466 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms