Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Scn3aA2ASI5 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Scn3aA2ASI5 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.91□□□□□ -1.46
Scn3aA2ASI5 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Scn3aA2ASI5 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.91□□□□□ -1.46
Scn3aA2ASI5 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Scn3aA2ASI5 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Scn3aA2ASI5 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Scn3aA2ASI5 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Scn3aA2ASI5 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Scn3aA2ASI5 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.9□□□□□ -1.46
Scn3aA2ASI5 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.9□□□□□ -1.46
Scn3aA2ASI5 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Scn3aA2ASI5 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Scn3aA2ASI5 Gm9499-201ENSMUST00000180888 964 ntBASIC5.9□□□□□ -1.46
Scn3aA2ASI5 Gm19921-201ENSMUST00000210505 703 ntBASIC5.9□□□□□ -1.46
Scn3aA2ASI5 Gm9685-201ENSMUST00000211275 538 ntBASIC5.9□□□□□ -1.46
Scn3aA2ASI5 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.9□□□□□ -1.46
Scn3aA2ASI5 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Scn3aA2ASI5 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Scn3aA2ASI5 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Scn3aA2ASI5 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.9□□□□□ -1.46
Scn3aA2ASI5 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Scn3aA2ASI5 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Scn3aA2ASI5 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Scn3aA2ASI5 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Scn3aA2ASI5 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.9□□□□□ -1.47
Scn3aA2ASI5 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.9□□□□□ -1.47
Scn3aA2ASI5 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Scn3aA2ASI5 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.9□□□□□ -1.47
Scn3aA2ASI5 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.9□□□□□ -1.47
Scn3aA2ASI5 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Scn3aA2ASI5 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm15171-201ENSMUST00000122191 334 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm28097-201ENSMUST00000187333 366 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 AC152169.2-201ENSMUST00000224558 613 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm43953-201ENSMUST00000203709 2867 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm23274-201ENSMUST00000104056 130 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm11366-201ENSMUST00000119279 429 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm15791-201ENSMUST00000120365 319 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm5383-201ENSMUST00000121177 617 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm22160-201ENSMUST00000158405 328 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm20674-201ENSMUST00000177452 369 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm38011-201ENSMUST00000193312 279 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.89□□□□□ -1.47
Scn3aA2ASI5 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.88□□□□□ -1.47
Scn3aA2ASI5 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scn3aA2ASI5 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scn3aA2ASI5 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Scn3aA2ASI5 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Scn3aA2ASI5 Mir193b-201ENSMUST00000103784 79 ntBASIC5.88□□□□□ -1.47
Scn3aA2ASI5 Gm14485-201ENSMUST00000119489 493 ntBASIC5.88□□□□□ -1.47
Scn3aA2ASI5 Gm25907-201ENSMUST00000158486 125 ntBASIC5.88□□□□□ -1.47
Scn3aA2ASI5 Gm6047-201ENSMUST00000167221 574 ntBASIC5.88□□□□□ -1.47
Scn3aA2ASI5 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.88□□□□□ -1.47
Scn3aA2ASI5 Mir7669-201ENSMUST00000183442 58 ntBASIC5.88□□□□□ -1.47
Scn3aA2ASI5 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.88□□□□□ -1.47
Scn3aA2ASI5 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.88□□□□□ -1.47
Scn3aA2ASI5 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.88□□□□□ -1.47
Scn3aA2ASI5 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scn3aA2ASI5 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scn3aA2ASI5 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scn3aA2ASI5 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Scn3aA2ASI5 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Scn3aA2ASI5 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scn3aA2ASI5 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms