Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm6520-201ENSMUST00000200636 410 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Gm43973-201ENSMUST00000203562 210 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Gm18255-201ENSMUST00000211316 765 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Gm24525-201ENSMUST00000082917 151 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Gm38264-201ENSMUST00000194850 2032 ntBASIC5.09□□□□□ -1.6
Cdc40Q9DC48 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Cdc40Q9DC48 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Cdc40Q9DC48 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Cdc40Q9DC48 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Cdc40Q9DC48 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
Cdc40Q9DC48 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm11970-201ENSMUST00000116105 320 ntBASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm23839-201ENSMUST00000116957 109 ntBASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm25116-201ENSMUST00000157191 122 ntBASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm23069-201ENSMUST00000158240 311 ntBASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm24295-201ENSMUST00000158298 131 ntBASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm26172-201ENSMUST00000158421 134 ntBASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm23872-201ENSMUST00000175432 77 ntBASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm26970-201ENSMUST00000182990 964 ntBASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm27225-201ENSMUST00000183833 557 ntBASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm27855-201ENSMUST00000184122 128 ntBASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm37336-202ENSMUST00000193705 468 ntBASIC5.08□□□□□ -1.6
Cdc40Q9DC48 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Snora30-201ENSMUST00000083325 130 ntBASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdc40Q9DC48 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm25758-201ENSMUST00000103987 129 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms