Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm11369-201ENSMUST00000120812 318 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm12488-201ENSMUST00000122449 499 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm23279-201ENSMUST00000157912 97 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm37719-201ENSMUST00000194615 292 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm43516-201ENSMUST00000196891 322 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm7733-201ENSMUST00000199038 919 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm7181-201ENSMUST00000202197 434 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 AC129323.1-201ENSMUST00000216733 470 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 AC124356.2-201ENSMUST00000221874 336 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm8412-201ENSMUST00000077493 440 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm26226-201ENSMUST00000082509 116 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Gm43164-201ENSMUST00000202529 2128 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 AC115910.1-201ENSMUST00000221188 4275 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm15660-201ENSMUST00000118997 478 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm11484-201ENSMUST00000119808 338 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm15152-201ENSMUST00000121540 394 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm11679-201ENSMUST00000121830 779 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm23229-201ENSMUST00000157297 105 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm22261-201ENSMUST00000158691 324 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm16125-201ENSMUST00000159003 339 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Mir5128-201ENSMUST00000175217 84 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm26970-201ENSMUST00000182990 964 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm29454-201ENSMUST00000190805 393 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm37024-201ENSMUST00000192224 868 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm43779-201ENSMUST00000196691 829 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm44219-201ENSMUST00000203005 273 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm44559-201ENSMUST00000207177 1012 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm44683-201ENSMUST00000209088 484 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 AC158511.1-201ENSMUST00000223622 764 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 AC161884.2-201ENSMUST00000224513 227 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 CT025579.3-201ENSMUST00000224543 451 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 CT030238.4-203ENSMUST00000227343 836 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 AC122408.2-201ENSMUST00000217901 1391 ntBASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Smc1aQ9CU62 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Gm37400-201ENSMUST00000193148 3605 ntBASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Mir546-201ENSMUST00000102105 121 ntBASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Smc1aQ9CU62 Gm12131-201ENSMUST00000117479 359 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms