Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 AC120153.1-201ENSMUST00000226502 1311 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm16511-201ENSMUST00000120019 564 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm24517-201ENSMUST00000122560 107 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm26024-201ENSMUST00000158657 322 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm24735-201ENSMUST00000158859 118 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm3140-201ENSMUST00000163523 481 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm27158-201ENSMUST00000183813 238 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm38075-201ENSMUST00000191979 920 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm44225-201ENSMUST00000203582 186 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm44984-201ENSMUST00000207802 394 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 AC091260.1-201ENSMUST00000216112 229 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 AC124399.1-201ENSMUST00000218334 590 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 AC116460.1-201ENSMUST00000219040 313 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm31711-201ENSMUST00000220687 196 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm9293-201ENSMUST00000223096 306 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 AC115735.5-201ENSMUST00000228386 397 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm6195-201ENSMUST00000063059 357 ntBASIC7.29□□□□□ -1.24
Trim11Q99PQ2 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim11Q99PQ2 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Gm7048-201ENSMUST00000199395 1891 ntBASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Gm15189-201ENSMUST00000121164 1966 ntBASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Gm24869-201ENSMUST00000104072 128 ntBASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Gm5601-201ENSMUST00000118909 972 ntBASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Gm13444-201ENSMUST00000119445 522 ntBASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Gm16412-201ENSMUST00000121602 273 ntBASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Gm22158-201ENSMUST00000158411 126 ntBASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Gm10177-202ENSMUST00000161698 207 ntBASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Gm25675-201ENSMUST00000174979 118 ntBASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Gm44370-201ENSMUST00000175436 112 ntBASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Gm8221-201ENSMUST00000178052 564 ntBASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Gm27013-201ENSMUST00000182441 1024 ntBASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Mir6987-201ENSMUST00000184789 73 ntBASIC7.28□□□□□ -1.24
Trim11Q99PQ2 Gm27539-201ENSMUST00000184971 224 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms