Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm28640-201ENSMUST00000190918 550 ntBASIC4.24□□□□□ -1.73
Nup35Q8R4R6 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC4.24□□□□□ -1.73
Nup35Q8R4R6 Gm43392-201ENSMUST00000196560 434 ntBASIC4.24□□□□□ -1.73
Nup35Q8R4R6 Mir409-201ENSMUST00000198153 79 ntBASIC4.24□□□□□ -1.73
Nup35Q8R4R6 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC4.24□□□□□ -1.73
Nup35Q8R4R6 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC4.24□□□□□ -1.73
Nup35Q8R4R6 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC4.24□□□□□ -1.73
Nup35Q8R4R6 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Nup35Q8R4R6 Gm18851-201ENSMUST00000210087 1058 ntBASIC4.24□□□□□ -1.73
Nup35Q8R4R6 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC4.24□□□□□ -1.73
Nup35Q8R4R6 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC4.24□□□□□ -1.73
Nup35Q8R4R6 AC154846.2-201ENSMUST00000228805 424 ntBASIC4.24□□□□□ -1.73
Nup35Q8R4R6 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nup35Q8R4R6 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nup35Q8R4R6 AC117769.3-201ENSMUST00000225814 1664 ntBASIC4.24□□□□□ -1.73
Nup35Q8R4R6 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.24□□□□□ -1.73
Nup35Q8R4R6 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.24□□□□□ -1.73
Nup35Q8R4R6 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nup35Q8R4R6 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nup35Q8R4R6 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nup35Q8R4R6 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nup35Q8R4R6 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Nup35Q8R4R6 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm13195-201ENSMUST00000117229 261 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm12653-201ENSMUST00000117778 561 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm11212-201ENSMUST00000118337 618 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm12820-201ENSMUST00000119233 342 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm12303-201ENSMUST00000119506 673 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm13367-201ENSMUST00000119955 796 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm12267-201ENSMUST00000121609 761 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm15022-201ENSMUST00000122074 746 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm23211-201ENSMUST00000122717 308 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm26410-201ENSMUST00000157670 261 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm23318-201ENSMUST00000158000 108 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm2619-202ENSMUST00000166777 651 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm24949-201ENSMUST00000183609 215 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Mir6361-201ENSMUST00000185079 101 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Mir6952-201ENSMUST00000185092 61 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm37270-201ENSMUST00000194277 330 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm42694-201ENSMUST00000196951 358 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm5050-201ENSMUST00000197164 775 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm44252-201ENSMUST00000204187 330 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm45700-201ENSMUST00000205866 347 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm19196-201ENSMUST00000209258 357 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 AC124510.2-201ENSMUST00000221958 683 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Mir143-201ENSMUST00000083511 63 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm18716-201ENSMUST00000204507 1603 ntBASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Nup35Q8R4R6 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms