Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.77□□□□□ -1.49
Clrn1Q8K445 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm38261-201ENSMUST00000192608 316 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 AC099760.1-201ENSMUST00000196300 153 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm32158-201ENSMUST00000200135 404 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm36247-201ENSMUST00000211834 285 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.77□□□□□ -1.49
Clrn1Q8K445 AC112274.2-201ENSMUST00000218436 170 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm4052-201ENSMUST00000220890 451 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm9628-201ENSMUST00000222169 725 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm2544-201ENSMUST00000222702 756 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm22351-201ENSMUST00000083925 107 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm7754-201ENSMUST00000223075 2064 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 AC161247.1-201ENSMUST00000217744 2295 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.77□□□□□ -1.49
Clrn1Q8K445 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Clrn1Q8K445 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm43781-201ENSMUST00000197634 2681 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm14600-201ENSMUST00000121032 630 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm13471-201ENSMUST00000122057 433 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm16269-201ENSMUST00000160532 409 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm27348-201ENSMUST00000184511 170 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm29598-201ENSMUST00000188996 588 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm37784-201ENSMUST00000193233 189 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm5694-201ENSMUST00000195648 641 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 AL603630.1-201ENSMUST00000214781 147 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm5055-201ENSMUST00000215697 581 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm34005-201ENSMUST00000215834 282 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm18955-201ENSMUST00000223173 649 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm2614-201ENSMUST00000223227 403 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 AC156803.1-201ENSMUST00000224407 820 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm23628-201ENSMUST00000082464 173 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.76□□□□□ -1.49
Clrn1Q8K445 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Clrn1Q8K445 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms