Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm23750-201ENSMUST00000104222 132 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm22468-201ENSMUST00000116680 120 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm26248-201ENSMUST00000116700 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm26137-201ENSMUST00000116701 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm26190-201ENSMUST00000116704 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm24617-201ENSMUST00000116705 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm25778-201ENSMUST00000116713 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm25774-201ENSMUST00000116717 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm22102-201ENSMUST00000116730 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm23177-201ENSMUST00000116784 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm24193-201ENSMUST00000116801 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm24744-201ENSMUST00000116833 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm24427-201ENSMUST00000116896 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm22346-201ENSMUST00000116918 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm23606-201ENSMUST00000116938 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm22029-201ENSMUST00000116940 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm26298-201ENSMUST00000116956 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm23844-201ENSMUST00000116959 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm24484-201ENSMUST00000117009 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm25347-201ENSMUST00000117026 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm22112-201ENSMUST00000117032 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 n-R5s61-201ENSMUST00000122711 118 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm24236-201ENSMUST00000157794 134 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm24216-201ENSMUST00000158259 117 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm22991-201ENSMUST00000178126 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm25754-201ENSMUST00000178653 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm22419-201ENSMUST00000178780 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm24802-201ENSMUST00000178897 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm25208-201ENSMUST00000178964 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm24567-201ENSMUST00000179294 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm23943-201ENSMUST00000179712 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm25228-201ENSMUST00000180121 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm23304-201ENSMUST00000180209 121 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm27541-201ENSMUST00000184078 122 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm28885-201ENSMUST00000185615 563 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm29509-201ENSMUST00000185716 321 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm38011-201ENSMUST00000193312 279 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm8719-201ENSMUST00000203602 534 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 AC157572.4-201ENSMUST00000228203 549 ntBASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Atg4aQ8C9S8 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Gm6645-201ENSMUST00000118505 2726 ntBASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Gm15803-201ENSMUST00000120118 394 ntBASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Gm7670-201ENSMUST00000121272 641 ntBASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Gm10784-201ENSMUST00000178715 238 ntBASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Gm28429-201ENSMUST00000188521 363 ntBASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Ighv1-27-201ENSMUST00000194473 340 ntBASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Rybp-ps-201ENSMUST00000069489 681 ntBASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 n-R5s36-201ENSMUST00000082998 119 ntBASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Atg4aQ8C9S8 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Gm37485-201ENSMUST00000192326 2953 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Gm13503-201ENSMUST00000119017 446 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Gm16420-201ENSMUST00000120258 856 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 n-R5s174-201ENSMUST00000122638 121 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms