Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Gm28877-201ENSMUST00000191349 604 ntBASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Gm43392-201ENSMUST00000196560 434 ntBASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Rfx6Q8C7R7 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm23739-201ENSMUST00000102295 108 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm25919-201ENSMUST00000104271 132 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm13890-201ENSMUST00000117578 390 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm16149-201ENSMUST00000117631 309 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm13473-201ENSMUST00000119289 367 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm6542-201ENSMUST00000153606 772 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm23250-201ENSMUST00000157444 267 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm24065-201ENSMUST00000157487 264 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm19791-201ENSMUST00000180398 859 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm8941-201ENSMUST00000181451 899 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm28011-201ENSMUST00000184097 175 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Mir6412-201ENSMUST00000184477 97 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm37751-201ENSMUST00000192440 1198 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm8826-201ENSMUST00000193161 948 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm43215-201ENSMUST00000199108 252 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm43531-201ENSMUST00000200676 1114 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 AC154252.1-201ENSMUST00000226041 473 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Rfx6Q8C7R7 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.53□□□□□ -1.52
Rfx6Q8C7R7 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx6Q8C7R7 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.53□□□□□ -1.52
Rfx6Q8C7R7 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Rfx6Q8C7R7 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Rfx6Q8C7R7 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx6Q8C7R7 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Rfx6Q8C7R7 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx6Q8C7R7 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx6Q8C7R7 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx6Q8C7R7 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms