Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm28851-202ENSMUST00000189757 484 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28461-201ENSMUST00000190023 484 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm29184-201ENSMUST00000190038 334 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28354-201ENSMUST00000190904 678 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm45405-201ENSMUST00000211544 609 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 AC113305.1-201ENSMUST00000214664 724 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 AL807824.1-201ENSMUST00000223151 183 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 AV026068-231ENSMUST00000225862 482 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 AC162857.1-201ENSMUST00000226614 400 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm42819-201ENSMUST00000199630 5121 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm14245-201ENSMUST00000118939 1843 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Gm37033-201ENSMUST00000193199 7350 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Gm14610-201ENSMUST00000118358 966 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Gm6305-201ENSMUST00000121027 1012 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Scarna6-201ENSMUST00000158656 265 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Gm20397-201ENSMUST00000174520 362 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Gm26968-201ENSMUST00000182894 481 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Mir7687-201ENSMUST00000184722 59 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Gm37741-201ENSMUST00000191768 1256 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Gm37152-201ENSMUST00000193369 1175 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Gm42164-201ENSMUST00000198881 379 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Gm18325-201ENSMUST00000203228 835 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 AC117656.3-205ENSMUST00000224606 1205 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Olfr815-201ENSMUST00000071557 951 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Mir133b-201ENSMUST00000083546 119 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Gm37249-201ENSMUST00000195185 2869 ntBASIC7.81□□□□□ -1.16
Usp40Q8BWR4 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm45516-201ENSMUST00000211588 4182 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms