Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm45382-201ENSMUST00000210607 151 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm4263-202ENSMUST00000221392 667 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm18620-201ENSMUST00000222295 324 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 AC168880.1-201ENSMUST00000225113 707 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm8412-201ENSMUST00000077493 440 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Mir804-201ENSMUST00000103251 95 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm15001-201ENSMUST00000117657 795 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm14115-201ENSMUST00000119242 482 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm11719-201ENSMUST00000119399 351 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm14747-201ENSMUST00000149888 984 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Mir1945-201ENSMUST00000157919 78 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm25904-201ENSMUST00000158491 143 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm4152-201ENSMUST00000172675 259 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm24812-201ENSMUST00000175315 284 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm27219-201ENSMUST00000184633 742 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm36986-201ENSMUST00000195320 353 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm43315-201ENSMUST00000198120 313 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm8911-201ENSMUST00000213986 652 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm18487-201ENSMUST00000215826 878 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm19987-201ENSMUST00000216339 499 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 AC159472.1-201ENSMUST00000218178 463 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rnf38Q8BI21 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
Rnf38Q8BI21 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rnf38Q8BI21 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rnf38Q8BI21 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.8□□□□□ -1.48
Rnf38Q8BI21 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rnf38Q8BI21 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.8□□□□□ -1.48
Rnf38Q8BI21 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rnf38Q8BI21 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Rnf38Q8BI21 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rnf38Q8BI21 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
Rnf38Q8BI21 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Rnf38Q8BI21 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rnf38Q8BI21 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rnf38Q8BI21 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rnf38Q8BI21 Gm26289-201ENSMUST00000104169 131 ntBASIC5.8□□□□□ -1.48
Rnf38Q8BI21 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Rnf38Q8BI21 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rnf38Q8BI21 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms