Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 AC134577.3-201ENSMUST00000226490 3000 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Grik1-209ENSMUST00000227986 2942 ntBASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Gm42577-201ENSMUST00000201367 3211 ntBASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Gm14615-201ENSMUST00000117575 1816 ntBASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Gm7146-201ENSMUST00000116079 739 ntBASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Gm12041-201ENSMUST00000121606 602 ntBASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Gm13471-201ENSMUST00000122057 433 ntBASIC11.82□□□□□ -0.52
Trim41Q5NCC3 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Gm25717-201ENSMUST00000158631 353 ntBASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Gm9529-201ENSMUST00000177598 579 ntBASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Gm24969-201ENSMUST00000180331 79 ntBASIC11.82□□□□□ -0.52
Trim41Q5NCC3 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Gm9245-201ENSMUST00000200528 983 ntBASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Gm44111-201ENSMUST00000204649 399 ntBASIC11.82□□□□□ -0.52
Trim41Q5NCC3 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 AC104832.1-201ENSMUST00000222938 550 ntBASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim41Q5NCC3 Gm37906-201ENSMUST00000192050 3035 ntBASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Gm14711-201ENSMUST00000117056 217 ntBASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Gm5793-201ENSMUST00000119393 630 ntBASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Gm15791-201ENSMUST00000120365 319 ntBASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Gm3835-201ENSMUST00000120752 403 ntBASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Gm25909-201ENSMUST00000157619 121 ntBASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Gm24853-201ENSMUST00000158026 121 ntBASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Mir8118-201ENSMUST00000183962 129 ntBASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Gm21654-201ENSMUST00000188086 691 ntBASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Gm28467-201ENSMUST00000190981 318 ntBASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Gm8774-201ENSMUST00000203621 692 ntBASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Gm18467-201ENSMUST00000208805 434 ntBASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Gm26442-201ENSMUST00000082588 153 ntBASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Gm23614-201ENSMUST00000082598 107 ntBASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Gm36933-201ENSMUST00000194945 3071 ntBASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Gm43588-201ENSMUST00000201862 2298 ntBASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 AC111010.1-203ENSMUST00000227287 1548 ntBASIC11.81□□□□□ -0.52
Trim41Q5NCC3 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trim41Q5NCC3 AC153152.1-201ENSMUST00000221105 2742 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm15149-201ENSMUST00000119370 360 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm14229-201ENSMUST00000121178 850 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm23740-201ENSMUST00000157385 100 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm23754-201ENSMUST00000157576 63 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm23205-201ENSMUST00000158671 103 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm3140-201ENSMUST00000163523 481 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms